Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0949 |
Symbol | |
ID | 4846020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 930758 |
End bp | 932611 |
Gene Length | 1854 bp |
Protein Length | 617 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640115635 |
Product | type II secretion system protein E |
Protein accession | YP_001046864 |
Protein GI | 126178899 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0134957 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGATCGG CGCTGGAAGC AACGGTAACC CTCCCCTTCG AGCCCGAGTT CATCGACGAG GGGAACGACT GCTACAACAA CGTGGAGTCC TGCGCACTCT ACCGGATGCT CCCGGCAAAC GCCCGCGACT ACGTCAAGGC GAGCCCCCAC CTGCTCGAGT ACCTCCACAT CCTGCCGGTC AACACCGTCG GCATCCCGCT CTTCCTCTCG GAGCTGAAGC GGGACTTAAA ATCGATGGAG AACCCGAACA TCATCTACCC GGTGAACGAG ACGACGTTCA TCCACATCTT CCCGGACCCG AACGACGTCC GGAACTGGTA CATCCCGATC GAGCCGGCAT TTCTGCACTC TGTAAAAGAG ATCCTCCCGG TGATCGAGGA GAAACTGATC GATATGATCG ATGCCCTCGA GGAGGAGCCG GTGACCGAAA AGGCACGGAT CGGGGTGCTG AAGAATTTCA TCCAGCAACT CGTCTACATC AAGAAGCCGG GCGAGGTGAT CGACAAGTCC CTGCTTGCCG GCGGGAAATC GAAAGACCTC AAACTCCGGA TCAAGACCTT CCTCACCTCC GAGATCGGCG CGCCGAAGCG ACCGCAGGTT TCGGGGCGCC AGGAACTTGC CGACGGGCGG ATCATCCTCA CGCAGCAGGA GTACAAGGCG CTCGAGTACA TGATAATCCG CGACAAGATC GAGATGGGGA CGCTCAAACC GTTTCTCTCC GACAGGTATA TCGAGGATAT CACCTGCGAC GGCGTCGGGC CGATCTTCAT CGAGCACAAG ATCTTCAAAG GGTTGAAATC GGTCATCGGG TTTCGGGACT CCCAGGAACT CGACAACTTC GTCGTCAAAC TCGCCGAGCG AATCAAACGG CCGCTGACGT ACAGGAACCC CATCGTGGAC TCGACCCTCC CCGACGGCTC GCGTATCAAC ATCGTCTACG GAACCGAGAT CAGCAAGCAC GGAAGCAACT TCACCATTCG TAAGGTGAAC GAAGTGCCGC TGAGCATCCT GCAGGTCATC GAGAGCGGGG CGTGCGACTA CATGATGGCC GCCTACCTCT GGATCTGCCT TGAGTACGGG ATGTCGATGT TCGTCTCCGG TGAGACCGCA AGCGGCAAGA CGACGACGTT GAACGCCCTC ACGACCTTCC TCCCGCCCGA GAACAAGATC GTCACCATCG AGGATACCCC GGAACTGACC GTTCCCCACA GGAACTGGAC ACGCGAGGTC GCGAAAGCCA AAGGAAAGGG CGAAGGGGAA GGCTCCGAGG TCACGATGTT CGACCTCCTC AAAGCTGCGC TGCGTCAGCG CCCGAACCAG ATCCTGGTCG GTGAGATTCG TGGAGTGGAA GGGTCCGTCG CATTCTCCGC AATGCAGACC GGCCACCCGG TGATGAGCAC CTTCCACGCA GCGTCGGTCG AGAAACTGAT CCAGCGTCTC TGCGGCGACC CGATCAACAT CCCCAAGACC TACGTCGACA ACTTAAACCT GGTCATCATC CAGAGTGCGG TAAAACTCCC CCAGGGGGGA ACCGTGCGGC GGATGCTCAG CGTCAACGAA CTCGTGGGCT ACGACCCCGA GACGCAGGGA TTCTCCTTCA TGGCGGCGTT CGTCTGGGAC CCCGCCACCG ACTCCTTCAC CTTTACCGGG AAAGGAAGCA GTTACCTGCT TGAAAACAAG ATCGCAACGA TGCTCGGCAT CCCCGAGAAC CGGCGGGCCG AGATCTACGA TGAAGTCGAT AAACGCGCCA AAATTCTTGA ACGGCTTCAC AAGGCCGGGT ACACCCAGTT CTGGGATCTC TTCCACATGA CCACGAAGAT CAAGAAGCAG GGTCTGCTCA ACATCGAGGT GTAA
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Protein sequence | MGSALEATVT LPFEPEFIDE GNDCYNNVES CALYRMLPAN ARDYVKASPH LLEYLHILPV NTVGIPLFLS ELKRDLKSME NPNIIYPVNE TTFIHIFPDP NDVRNWYIPI EPAFLHSVKE ILPVIEEKLI DMIDALEEEP VTEKARIGVL KNFIQQLVYI KKPGEVIDKS LLAGGKSKDL KLRIKTFLTS EIGAPKRPQV SGRQELADGR IILTQQEYKA LEYMIIRDKI EMGTLKPFLS DRYIEDITCD GVGPIFIEHK IFKGLKSVIG FRDSQELDNF VVKLAERIKR PLTYRNPIVD STLPDGSRIN IVYGTEISKH GSNFTIRKVN EVPLSILQVI ESGACDYMMA AYLWICLEYG MSMFVSGETA SGKTTTLNAL TTFLPPENKI VTIEDTPELT VPHRNWTREV AKAKGKGEGE GSEVTMFDLL KAALRQRPNQ ILVGEIRGVE GSVAFSAMQT GHPVMSTFHA ASVEKLIQRL CGDPINIPKT YVDNLNLVII QSAVKLPQGG TVRRMLSVNE LVGYDPETQG FSFMAAFVWD PATDSFTFTG KGSSYLLENK IATMLGIPEN RRAEIYDEVD KRAKILERLH KAGYTQFWDL FHMTTKIKKQ GLLNIEV
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