Gene Memar_0936 details

Gene Information

• Locus tag: Memar_0936
• ID: 4847987
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanoculleus marisnigri JR1
• Kingdom: Archaea
• Replicon accession: NC_009051
• Strand: +
• Start bp: 915349
• End bp: 917247
• Gene Length: 1899 bp
• Protein Length: 632 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 640115622
• Product: hypothetical protein
• Protein accession: YP_001046851
• Protein GI: 126178886
• COG category: [K] Transcription
• COG ID: [COG1293] Predicted RNA-binding protein homologous to eukaryotic snRNP

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.0251474
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGACAC TACAGGGAAT GAGCGGGGTC GATCTTCGTG CGCTGGTAGC GGAAGCTGCC 
GATCGCCTCC CGCTCTGGGT CGGCAAGATC TACCAGTTCG ACGCGAAGAC CCTCGGCATC 
AGGCTGAACG GTGAAGATCG GGCGAAGTAC CTGTTCCTCA TCGAGACGGG ACGGCGCGCC 
CACTTCACCG CAGAGTTTCC TGTGCCTCCA AAGAACCCGC CGAGTTTCGC GATGCTGCTC 
CGGAAGCACC TCGAGGGCGG GAAGGTGCTC GGTATCCGCC AGCTCGGGCT CGAGCGCACG 
ATGAGCCTCG ACATCGGGAA GCGGGATACG ACCTACCACC TCATCTTCGA GCTCTTCGAC 
GAGGGGAACG CCGTCCTCTG CGACGAAGGC TACACGATCA TCAAACCCCT CTGGCACCAC 
CGGTTCAAGA CCCGGGAGGT GGTCCCGGGC GCGGTCTACG CCTTCGAAGG GTCCGACTGC 
TCGTCTCTCT CGCCGGAGGC GTTCGGGTCG ATGCTTGCAG AGTCCGACCG CGACATCGTC 
CGGACGCTCG CCGTCGGGTG CATGCTCGGC GGCGCGTATG CCGAAGAGGT CTGCAGGATC 
GTGGGCGTCG AGAAGAGCGC TGCCGCCGCG GAGGTGGACG CGGAGGCGGT TCGGGAGGCG 
CTCGAACGGC TGATGGCCGA CGTCGGGCAG CGCCGTGAAC CGGTGATAAC GGCGTCCGGG 
TGCTGGCCGG TGGTGCTTGC CGGTGACGAG GTTCGCGAGC GGTTTGCGAC CTTCAGCGAG 
GCGCTGGATG CCTTCTACCC GAAGACGGTG GGCGGAAAGG AGGAGGCCGC GGCCGGGAAG 
CCCCGCCTCT CCCAGGCGGA GGTGATCCGA CGGCGGCAGG CGGAGGCGAT CAAAGGGTTC 
GAGAAGAAGA TCGAGCGTAA TCAGCGGATC GTGGAGGTGA TCTACGAGAA CTACACTGCT 
GTTGCCGGGA TCATAGCGAC GCTCGATGAG GCGAGCAAAA ACCGGTCGTG GCAGGAGATC 
GAGAAAATCC TCAAAGAGAA CGGCGATAAC CCTGCGGCAA AGATGGTCCG TGCGATTCAC 
CCCGCGGACG CGGCGGTTGA CGTCGATCTC TCGGGGGAAC GGGTGAAGAT CTATGTCCAC 
GAGACGATCG AGCAGAACCT CGGCCGCTAC TACGACCAGA TCAAGAAGTT CAAGAAGAAG 
AAGACGGGCG CGCTCGCGGC CATGGAGCGG ACGGTTCCCG AGAAGCCCCG GACGAAGCGG 
AACCTTCCCC TCCAGAAAAA GCGGTGGTAT CACCGCTTCC GCTGGTTCAC CACCAGCGAC 
GGCACCCTTG TCATCGGCGG CCGGGACGCC TCCCAGAACG AGGAACTCGT CAAGAAGTAC 
ATGGAAGGCG GCGACCTCTT CGTCCACGCC GACGTCCACG GCGGGAGCGT CGTCATCGTG 
AAGGGCACGA CTGAACACAT GGACGAGGCC GTGCGGTTCG CCGCGTCCTA CTCCAACGCC 
TGGAAGGCCG GGCACTTCAC GGCGGACGTC TACGCCGCCC GGCCCGACCA GGTGAGCAAG 
ACGGCCGAGT CCGGCGAGTA CGTGGCGAGA GGCGCCTTCA TCGTCCGGGG CGAGCGGCAA 
TACTTCAGGA ACGCGCCCCT GGGCGTGGCG ATCGGCCTTC AGATGGCGCC TGAGGTCGCC 
GTCATCGGTG GCCCGCCCGG TGCCGTCACC GGGCGTACGA AAGTGTGGGT GGAACTCCGT 
CCCGGGCAGT TCGAACCGAA CGACACCGCA AGGAAGGTGG TCCGGGCACT CAGGGAGAAA 
CTCTCGGAGG ACGAGTGGAA AGGGCTCAAG AACGCCCTGA ACACCGAGGC GGTCGCCGCA 
TTCGTCCCGC CGGGGGGCTC CGACATCGTG GAATCATGA 

 

Protein sequence

MATLQGMSGV DLRALVAEAA DRLPLWVGKI YQFDAKTLGI RLNGEDRAKY LFLIETGRRA 
HFTAEFPVPP KNPPSFAMLL RKHLEGGKVL GIRQLGLERT MSLDIGKRDT TYHLIFELFD 
EGNAVLCDEG YTIIKPLWHH RFKTREVVPG AVYAFEGSDC SSLSPEAFGS MLAESDRDIV 
RTLAVGCMLG GAYAEEVCRI VGVEKSAAAA EVDAEAVREA LERLMADVGQ RREPVITASG 
CWPVVLAGDE VRERFATFSE ALDAFYPKTV GGKEEAAAGK PRLSQAEVIR RRQAEAIKGF 
EKKIERNQRI VEVIYENYTA VAGIIATLDE ASKNRSWQEI EKILKENGDN PAAKMVRAIH 
PADAAVDVDL SGERVKIYVH ETIEQNLGRY YDQIKKFKKK KTGALAAMER TVPEKPRTKR 
NLPLQKKRWY HRFRWFTTSD GTLVIGGRDA SQNEELVKKY MEGGDLFVHA DVHGGSVVIV 
KGTTEHMDEA VRFAASYSNA WKAGHFTADV YAARPDQVSK TAESGEYVAR GAFIVRGERQ 
YFRNAPLGVA IGLQMAPEVA VIGGPPGAVT GRTKVWVELR PGQFEPNDTA RKVVRALREK 
LSEDEWKGLK NALNTEAVAA FVPPGGSDIV ES