Gene Memar_0926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_0926 
Symbol 
ID4846935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp905631 
End bp906380 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content60% 
IMG OID640115612 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001046841 
Protein GI126178876 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.598625 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAGAA TGGAAAACAA AGTTTGTGTT ATCACCGGAT CCACCAGCGG TATCGGTGAA 
GCCTGCGCGA AGGACATGGC AGCCGAGGGC GGCAAGGTCG TTGTCTCCGG CCGGAACGAG
AAAGAGGGCG CCAGGATCGT TAACGAGATA AAAGAAGCGG GTGGAGAGGT GATATTCATC
CGGGCGGACG TCACCGTCGA AGACGATGTC AGGAACCTCG TCGCGAAGAC CGTCGAGGCC
TTCGGGAGAC TGGACGTCTT CGTCGCCAAC TCCGGCGTCG GCAGCCTGGG CGACCCTCAC
GAAGTAGAGA CGGAAGAATG GGACAGGGTT CTTGACGTGA ACCTGAAGGG AATCTTCCTC
TGTGACAAGT ACGCTGTCCA GCAGATGTTG AAACAGGGTC AGGGAGGGGC CATCGTGAAT
ACCGGATCCA TACATAGTTT TGTCGCCAAG CAGGGCGTCA CAGCATACGG CGCCGCCAAA
GGGGGCGTCG CGATGCTGAC CCGGACGCTC GGCACCAGTT ACGCGGCGCA GGGGATCCGT
GCGAATTTTG TTGCACCCGG GTATATAGAC ACGCCCCTGC TCGCGGCCCT TCCGCGGGAA
GCCTACGAGG AACTGAAAAA ACTGCACCCG ATCGGGCGCC TGGGCCGGCC GATGGAGGTC
GCGAAGGCCG TCACGTTCCT GGCGAGCGAT GATGCGTCGA ACATAACCGG AACCAGCCTG
CTCGTCGACG GCGGGTACAC TGCAGTGTAG
 
Protein sequence
MGRMENKVCV ITGSTSGIGE ACAKDMAAEG GKVVVSGRNE KEGARIVNEI KEAGGEVIFI 
RADVTVEDDV RNLVAKTVEA FGRLDVFVAN SGVGSLGDPH EVETEEWDRV LDVNLKGIFL
CDKYAVQQML KQGQGGAIVN TGSIHSFVAK QGVTAYGAAK GGVAMLTRTL GTSYAAQGIR
ANFVAPGYID TPLLAALPRE AYEELKKLHP IGRLGRPMEV AKAVTFLASD DASNITGTSL
LVDGGYTAV