Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0926 |
Symbol | |
ID | 4846935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 905631 |
End bp | 906380 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640115612 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001046841 |
Protein GI | 126178876 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.598625 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAGAA TGGAAAACAA AGTTTGTGTT ATCACCGGAT CCACCAGCGG TATCGGTGAA GCCTGCGCGA AGGACATGGC AGCCGAGGGC GGCAAGGTCG TTGTCTCCGG CCGGAACGAG AAAGAGGGCG CCAGGATCGT TAACGAGATA AAAGAAGCGG GTGGAGAGGT GATATTCATC CGGGCGGACG TCACCGTCGA AGACGATGTC AGGAACCTCG TCGCGAAGAC CGTCGAGGCC TTCGGGAGAC TGGACGTCTT CGTCGCCAAC TCCGGCGTCG GCAGCCTGGG CGACCCTCAC GAAGTAGAGA CGGAAGAATG GGACAGGGTT CTTGACGTGA ACCTGAAGGG AATCTTCCTC TGTGACAAGT ACGCTGTCCA GCAGATGTTG AAACAGGGTC AGGGAGGGGC CATCGTGAAT ACCGGATCCA TACATAGTTT TGTCGCCAAG CAGGGCGTCA CAGCATACGG CGCCGCCAAA GGGGGCGTCG CGATGCTGAC CCGGACGCTC GGCACCAGTT ACGCGGCGCA GGGGATCCGT GCGAATTTTG TTGCACCCGG GTATATAGAC ACGCCCCTGC TCGCGGCCCT TCCGCGGGAA GCCTACGAGG AACTGAAAAA ACTGCACCCG ATCGGGCGCC TGGGCCGGCC GATGGAGGTC GCGAAGGCCG TCACGTTCCT GGCGAGCGAT GATGCGTCGA ACATAACCGG AACCAGCCTG CTCGTCGACG GCGGGTACAC TGCAGTGTAG
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Protein sequence | MGRMENKVCV ITGSTSGIGE ACAKDMAAEG GKVVVSGRNE KEGARIVNEI KEAGGEVIFI RADVTVEDDV RNLVAKTVEA FGRLDVFVAN SGVGSLGDPH EVETEEWDRV LDVNLKGIFL CDKYAVQQML KQGQGGAIVN TGSIHSFVAK QGVTAYGAAK GGVAMLTRTL GTSYAAQGIR ANFVAPGYID TPLLAALPRE AYEELKKLHP IGRLGRPMEV AKAVTFLASD DASNITGTSL LVDGGYTAV
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