Gene Memar_0887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_0887 
Symbol 
ID4848217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp866308 
End bp867180 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content63% 
IMG OID640115573 
Productalpha/beta hydrolase fold 
Protein accessionYP_001046802 
Protein GI126178837 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0583236 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTATC TCACCGTCGG TAAAGAAAAC TCTGGCACCA TCGACCTCTA TTACGAGGAT 
CACGGTGCGG GCAGATCGGT CATCCTGGTC CATGGCTGGC CGCTCTCGAG CAAGTCCTGG
GAGAAACAGG TGCCGGTGCT GCTTGAATCG GGTTACCGTG TTGTCACCTA CGACCGCAGG
GGGTTTGGCA ACTCAGGCAA ACCGACCTTC GGCTACGATT ACGACACCCT GGCCGAAGAC
CTGCACAAAC TCATGACGGA ACTCGACCTC GCCGAGGCCA CGCTCGTCGG ATTCTCGATG
GGCGGCGGCG AGGTGGCCCG CTACCTCGGC ACCTACGGGA GCGATCGCGT GGAGAAGGCC
GTCTTCATAT CCGCGATCCC GCCGTTCCTC TTAAAGACGG CCGACAACCC CGAAGGCGTC
GACGGCAGCG TCTTTGACGG GATCATGGAG AGCATCGCCG CCGACCGTCC GGCGTTCCTC
TCCGGGTTCC TCTCGGACTT CTACAACGTC GACATCTTCG GGGGCGACCG GGTGAGCGAC
GAGGTTGTCC GCCTCAGCTG GAACGTCGCC GCCGCCGCGT CCCCTGTGGG CACGCTCGAC
TGCGTTCCCG CGTGGCTGAC CGACTTCCGG GACGATCTTG CGAGCATCGA CGTGCCGGTT
CTCGTGATCC ATGGCGACGC CGACCGGATC GTACCCTTCC CCGCCTCAGG GAAACGTACC
CCCGGGTTGG TCAAAGACAG CCGTCTCGTG GTGATCGAGG GCGGGCCGCA CGGGATCACC
TGGACCCACG CCGACAGAGT CAACCGCGAG TTACTGAATT TCCTCGGGCA GCGGGTTCAG
GCGGCGCAGC CGTTTGCAGC AAACCCCACG TAG
 
Protein sequence
MSYLTVGKEN SGTIDLYYED HGAGRSVILV HGWPLSSKSW EKQVPVLLES GYRVVTYDRR 
GFGNSGKPTF GYDYDTLAED LHKLMTELDL AEATLVGFSM GGGEVARYLG TYGSDRVEKA
VFISAIPPFL LKTADNPEGV DGSVFDGIME SIAADRPAFL SGFLSDFYNV DIFGGDRVSD
EVVRLSWNVA AAASPVGTLD CVPAWLTDFR DDLASIDVPV LVIHGDADRI VPFPASGKRT
PGLVKDSRLV VIEGGPHGIT WTHADRVNRE LLNFLGQRVQ AAQPFAANPT