Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0816 |
Symbol | |
ID | 4846620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 799322 |
End bp | 800224 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640115501 |
Product | periplasmic solute binding protein |
Protein accession | YP_001046731 |
Protein GI | 126178766 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.313747 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGACGA ATGGCAACAG CAATACCACT TCTCTATCTC TCGTCGCAGC CGTATTCACG GTCTTTTTGC TGGCGGCAGC CACGGCGGGA TGCACCGGCA CCGACCGGCA GAATGACGGG AAAATCGTCG TCGCAGTCAC CATACCGCCC GAAGAGGAGT TCGTAGAACG GGTGGGCGGC GATCACGTCC GGGTGATCCT GCTGGTGCCG CCGGGAGCCG ACCCGCACAC CTACGAACCC CCGCCGGGGG TCCTCGCCGA CGTCGCGGAG GCGGATATGT ACGCCGTGGT CGGTTCGGGG ATCGAGTTCG AACTCGCCTG GCGGGATAAG ATCGCCGCCC TGAACCCCGG GATGCTGGTC GTCGACTGTT CGTGCGGCGT CGACCTGATC GCGACCGGTG AGGGCGATCA TGCGGGAGCC GATCCACACA TCTGGACGTC CCCGAAGAAC GCGAGGGTCA TGGTTGAGGA GATCCGCGAA GGGCTCATAG CGGTTGATCC GGAGAACGCC GAAGACTACC GTCGGAACGC CGATGCCTAC CTCGGGGAAC TCGACGCCCT CGACGCCGAG ATCACCGGTG CGCTCGCCGC ATCGGGAGTG AAAACGGTCA TGGTCTACCA CTCGTCGTGG GCCTACCTCG CCCGGGACTA CGGCTTTGCT GAAGTGCCGA TCGAGAGCGA GGGCAAGGAG CCCTCGCCGC AGAGGCTGGA GCACCTCATC AAGCAGGCGG AGGAGGAGAA GATAAAGGTG ATATTCGCGT CGCCCGAGCA TTCCACCCGG AGCGCTGAGG TGATCGCGGA CGCGATCGGG GGCACCGTGG TGACGGTGAG CCCGCTCGCG AAGGACTACC TCGCGAACAT GCAACGCGTG GCCTCGGCGT TTGCGGAGAG CGGCAGACCA TGA
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Protein sequence | MGTNGNSNTT SLSLVAAVFT VFLLAAATAG CTGTDRQNDG KIVVAVTIPP EEEFVERVGG DHVRVILLVP PGADPHTYEP PPGVLADVAE ADMYAVVGSG IEFELAWRDK IAALNPGMLV VDCSCGVDLI ATGEGDHAGA DPHIWTSPKN ARVMVEEIRE GLIAVDPENA EDYRRNADAY LGELDALDAE ITGALAASGV KTVMVYHSSW AYLARDYGFA EVPIESEGKE PSPQRLEHLI KQAEEEKIKV IFASPEHSTR SAEVIADAIG GTVVTVSPLA KDYLANMQRV ASAFAESGRP
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