Gene Memar_0816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_0816 
Symbol 
ID4846620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp799322 
End bp800224 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content65% 
IMG OID640115501 
Productperiplasmic solute binding protein 
Protein accessionYP_001046731 
Protein GI126178766 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.313747 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGACGA ATGGCAACAG CAATACCACT TCTCTATCTC TCGTCGCAGC CGTATTCACG 
GTCTTTTTGC TGGCGGCAGC CACGGCGGGA TGCACCGGCA CCGACCGGCA GAATGACGGG
AAAATCGTCG TCGCAGTCAC CATACCGCCC GAAGAGGAGT TCGTAGAACG GGTGGGCGGC
GATCACGTCC GGGTGATCCT GCTGGTGCCG CCGGGAGCCG ACCCGCACAC CTACGAACCC
CCGCCGGGGG TCCTCGCCGA CGTCGCGGAG GCGGATATGT ACGCCGTGGT CGGTTCGGGG
ATCGAGTTCG AACTCGCCTG GCGGGATAAG ATCGCCGCCC TGAACCCCGG GATGCTGGTC
GTCGACTGTT CGTGCGGCGT CGACCTGATC GCGACCGGTG AGGGCGATCA TGCGGGAGCC
GATCCACACA TCTGGACGTC CCCGAAGAAC GCGAGGGTCA TGGTTGAGGA GATCCGCGAA
GGGCTCATAG CGGTTGATCC GGAGAACGCC GAAGACTACC GTCGGAACGC CGATGCCTAC
CTCGGGGAAC TCGACGCCCT CGACGCCGAG ATCACCGGTG CGCTCGCCGC ATCGGGAGTG
AAAACGGTCA TGGTCTACCA CTCGTCGTGG GCCTACCTCG CCCGGGACTA CGGCTTTGCT
GAAGTGCCGA TCGAGAGCGA GGGCAAGGAG CCCTCGCCGC AGAGGCTGGA GCACCTCATC
AAGCAGGCGG AGGAGGAGAA GATAAAGGTG ATATTCGCGT CGCCCGAGCA TTCCACCCGG
AGCGCTGAGG TGATCGCGGA CGCGATCGGG GGCACCGTGG TGACGGTGAG CCCGCTCGCG
AAGGACTACC TCGCGAACAT GCAACGCGTG GCCTCGGCGT TTGCGGAGAG CGGCAGACCA
TGA
 
Protein sequence
MGTNGNSNTT SLSLVAAVFT VFLLAAATAG CTGTDRQNDG KIVVAVTIPP EEEFVERVGG 
DHVRVILLVP PGADPHTYEP PPGVLADVAE ADMYAVVGSG IEFELAWRDK IAALNPGMLV
VDCSCGVDLI ATGEGDHAGA DPHIWTSPKN ARVMVEEIRE GLIAVDPENA EDYRRNADAY
LGELDALDAE ITGALAASGV KTVMVYHSSW AYLARDYGFA EVPIESEGKE PSPQRLEHLI
KQAEEEKIKV IFASPEHSTR SAEVIADAIG GTVVTVSPLA KDYLANMQRV ASAFAESGRP