Gene Memar_0810 details

Gene Information

• Locus tag: Memar_0810
• ID: 4845916
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanoculleus marisnigri JR1
• Kingdom: Archaea
• Replicon accession: NC_009051
• Strand: +
• Start bp: 793972
• End bp: 794670
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 640115495
• Product: cytochrome c-type biogenesis protein CcmB
• Protein accession: YP_001046725
• Protein GI: 126178760

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00450411
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCACGC TCGCCGTCAT CGCCCGGCGC GAGATAAGGC TCGCCCTCCG GAACCGGAGT 
GCCCTCATCG CGGCGCTCAT CTTCGCCGTA TGGTTCCCGG TCATGTCGGC CCTCGGGATC 
GCTGCAAGCG CCGGTGAAGA CGCTACGGCC GTTGCCGGCG GCATCGCCGC AATCACCCTC 
CCGGTCGGGG CATTTATGGG CTATCTCTTC TGCGCCGACG CCTTCCTCCG GGAGAAGCGG 
GACGGCTCCA TCGAGACGCT CCTCTGCACC CCGGTCTCTC TCCGCCGCCT CTGGGAGGGG 
AAGGCCGTCG GGGTCGCCGT GCCGGCGTAC CTGATGACCC TTGCCTCGGC CGCAGTGACC 
ATTGCGGTGG TTTACACCTT GTCGAGCGCT CCTATAGCCG GCGAACCCCT GCTCATCCTT 
CACCTCGCGG TCGTCGTCCC GGTCTGGATC GCCGCTGCGG CGGGGCTCAT CGGCGCGGCC 
CAGCTCGCGC TCGGGATGCG GGAGAACCAG ATCCTCGGGT TCGTCTTCAT CTTCGGGTTC 
ATCTTCCTCA TCGTCGTGCT CCAGGGCGTC ACACCGGGCG GGGGCCTCTC GGTGACGACG 
GAGGGTATTT TCGCGGCAGC AGGGCTCGCG CTCCTCGCTC TCGCCCGCTT CATCGCCGGG 
AAGGTGACGA AGGAGCGGAT CGTCCGGACG ATCCCGTGA 

 

Protein sequence

MSTLAVIARR EIRLALRNRS ALIAALIFAV WFPVMSALGI AASAGEDATA VAGGIAAITL 
PVGAFMGYLF CADAFLREKR DGSIETLLCT PVSLRRLWEG KAVGVAVPAY LMTLASAAVT 
IAVVYTLSSA PIAGEPLLIL HLAVVVPVWI AAAAGLIGAA QLALGMRENQ ILGFVFIFGF 
IFLIVVLQGV TPGGGLSVTT EGIFAAAGLA LLALARFIAG KVTKERIVRT IP