| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0770 |
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| Symbol | |
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| ID | 4846220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 749064 |
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| End bp | 751859 |
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| Gene Length | 2796 bp |
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| Protein Length | 931 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640115454 |
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| Product | DNA topoisomerase |
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| Protein accession | YP_001046685 |
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| Protein GI | 126178720 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01057] DNA topoisomerase I, archaeal |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0112956 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCATCTGA TCATAGCAGA AAAGAACATC TCGGCAAACC GGATCGCGCA GATCCTCGCC
GGCAACGAAA AAGTGAGAGC GACAAAGGAC GGAAGCGTAT CCACGTATTC CTTCGACACG
AAGACGGTGG TCGGCCTCAA AGGGCACGTG GTGGAGGTAG ACTTCGAGCC CGGCTACACG
AACTGGCGGA GCGAGACCCA CACGCCGCGA ACCCTCATCG ACGCAGGCAT CGTCAAGAAG
CCGACCGAGA AGAAGATCGT CAACCTCATC CAGAAACTCT CGAGGAAAGC GGATCTCGTC
ACCATCGCGA CCGATTATGA TACCGAGGGA GAACTGATCG GAAAGGAGGC CTACGAACTC
GTCCGTGCGG TGAACCCCAA CGTCAGGATC AACCGTGCCC GGTTCTCCGC GATAACCCCG
GCGGAGATCC GCACAGCGTT TGAGAACCTG ACCGACCTCG ACTTCGACCT CGCGGCTGCC
GGCGAGGCCC GCCAGACGGT CGACCTGATG TGGGGGGCAT CGCTGACCCG GTTCATCAGC
CTCGCGGCAC GCCGGGGCGG CACGAACATC CTCTCCGTCG GGCGGGTGCA GAGCCCGACG
CTCGCCATGA TCGTCGAGCG GGAGCGTGAG ATCGAGAGTT TCGTCCCCCA GACCTACTGG
ATGCTCTCGC TTGCAACCGA GAAAGACGGC GTAACGATCG AGGCGCGGCA TACCGCCGGG
CGGTTCACCG ACCACGAAGC GGCCCTCGCC GCGGAAGCGG GGACAAAGGA GCCGCTCGTC
GTCACGGACG TGAAAGAAGG GCAGAAGAAC GACCGGGCGC CGACGCCGTT CGACACCACG
ACCTTCATCG TCGCGGCGAG CCGCCTGGGC CTCTCGGCGG CGAACGCGAT GCGGCTTGCC
GAAGACCTCT ACATGAACGG GTACATCTCC TACCCGAGGA CCGACAACAC GGTTTACCCG
AAATCGCTGA ACCTGAACGC GATCCTCAAT ACCCTCAAAG GAGGCGTCTT CGACAAGGAC
GTCGCCTGGG TGCAGCAGAA CCGGCGGCCC GTCCCGACCC GGGGCAAGAA GGAGAGCACC
GACCACCCGC CGATTCACCC GACGGGCTCC GCGACCCGCG AGGCTCTCGG GCAGGACCGG
TGGAAGGTCT ACGAGCTCGT CGTGCGGCGG TTCCTCGCGA CCCTCTCTCC CGACGCGAAC
TGGGCGACCA CCAGGTGCAC CTTCGACGCG TCCGGCGAGG CCTACAAGGC CACGGGCGGC
AGGCTCCTCT ACGCCGGGTG GCGCCGGATC TACCCCTACT CGGAAGCGAA GGAGAACATC
CTCCCGGTGC TCGCCCCGGG TGAACGGCTG CCGATCAAGA ACGTGAACCT CGAGGAGAAG
GAGACGCAGC CGCCGGCGCG CTACTCCCAG AGCCGGCTCA TCCAGGTGAT GGAGGAACTC
GGCCTCGGCA CGAAGAGCAC CCGGCACGAG GTGATCGGCA AACTCGTCTC CCGCCGCTAC
GTGGAAGGCA ACCCGCTCCG CCCGACGCTT GTCGGGAGAG CCGTCATCGA CGCCCTCGAC
AACCACGCCG AGACGATCAC GGAGCCGGAG ATGACCCAGA CGCTCGAGGA GCACATGCAG
CTCATCAAAC AGAGCCAGCG CTCCCGCGAC GACGTCGTCA CCGAGTCCCG CGAGATGCTG
CATAGGGTCT TCGACAAACT CGAGGCGCAC AAGTCGGAGA TCGGCACCGA GATCATGGAA
CAGACCGCCG AGGAGCATAC CGTCGGCCCC TGCCCCGACT GCGGCCACGA TCTCCGGATC
CGGCACATCG GCGTCTCCCA GTTCATCGGC TGCACCGGCT ACCCCGAGTG CCGGTTCAAC
ATCAGCCTGC CCGGCAGCAC CTGGGGCAAG GCAATCCGGG TCGAAGCGAC CTGTCCGGAG
CACAACCTCT CCCACGTCCG CCTGATCCGG AAGGGCGCCC GGCCGTGGGA CATCGGCTGC
CCGCTCTGCA GTCACATCAC CTCGAACGTC GAGGCGCTCC GGATGATGCC CTCGATGACC
GACGATCTCA TGCAGCGCCT GCACGCGCAG CACATCTACA CGGTCTCCGA GATTGCGGGC
ATGCAGCCTG AAGACCTCGC AAAGGCCGTC GACGTCGGCA CAAAAGAGGC CGTAGAACTC
GCGAGAGAGG CAGAGGATGC ACTCGAGGTT CTCCGCCGCC GTTCGGAACT CAGGAAGTTC
GTCCGGAAGA TTGTGCCCCC GAGAAGGGGC CGGAGCCACG CGAAGATCAT CAAAAATCTC
CTCGGACAGG GGATCGGCGA TATCCACGCG CTCTCGGTGG CCGAACCCGC CGCGCTCAAG
AAGGCCGGGA TCCCGGAGGC TGCCGGAGCC GAACTCCTGG AAGCCGCCCG CGGGCTCTGC
AACGAGCGCG CCCTCCGGGA GGCCGGAGTT CCCGCGGTCA GCCTGAAGAA GTACCAGGCA
GGCGGCGTCG CGACTCTCGA CGATTTCTGT TATCTCCCCA TCCCCTACCT TGCAAGCAAA
ACCGGCATTA ACCCGGAAAC CGTACATAAA CATGTGGATC TGGTCTGCAG GCACCTCGGG
CGCCCTGCCC CCCAGAAGAT CTCCAGGACA GTCTTTGAGC GCGGGCGAAA AGAACTCCTG
GAGGTCCCCG GACTCGGCGA AGCGACCGTG GACAGGCTCT ACCTTGCAGG CATCTACGAC
GCCGCAACGC TCCGTGTTGC CGACCCGGAG GAGGTCTCCT CCGTCACCGG CATCCCGAAG
GCCAGACTCC GCGACTACAT CGGCCACCTG AAGTGA
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| Protein sequence | MHLIIAEKNI SANRIAQILA GNEKVRATKD GSVSTYSFDT KTVVGLKGHV VEVDFEPGYT
NWRSETHTPR TLIDAGIVKK PTEKKIVNLI QKLSRKADLV TIATDYDTEG ELIGKEAYEL
VRAVNPNVRI NRARFSAITP AEIRTAFENL TDLDFDLAAA GEARQTVDLM WGASLTRFIS
LAARRGGTNI LSVGRVQSPT LAMIVERERE IESFVPQTYW MLSLATEKDG VTIEARHTAG
RFTDHEAALA AEAGTKEPLV VTDVKEGQKN DRAPTPFDTT TFIVAASRLG LSAANAMRLA
EDLYMNGYIS YPRTDNTVYP KSLNLNAILN TLKGGVFDKD VAWVQQNRRP VPTRGKKEST
DHPPIHPTGS ATREALGQDR WKVYELVVRR FLATLSPDAN WATTRCTFDA SGEAYKATGG
RLLYAGWRRI YPYSEAKENI LPVLAPGERL PIKNVNLEEK ETQPPARYSQ SRLIQVMEEL
GLGTKSTRHE VIGKLVSRRY VEGNPLRPTL VGRAVIDALD NHAETITEPE MTQTLEEHMQ
LIKQSQRSRD DVVTESREML HRVFDKLEAH KSEIGTEIME QTAEEHTVGP CPDCGHDLRI
RHIGVSQFIG CTGYPECRFN ISLPGSTWGK AIRVEATCPE HNLSHVRLIR KGARPWDIGC
PLCSHITSNV EALRMMPSMT DDLMQRLHAQ HIYTVSEIAG MQPEDLAKAV DVGTKEAVEL
AREAEDALEV LRRRSELRKF VRKIVPPRRG RSHAKIIKNL LGQGIGDIHA LSVAEPAALK
KAGIPEAAGA ELLEAARGLC NERALREAGV PAVSLKKYQA GGVATLDDFC YLPIPYLASK
TGINPETVHK HVDLVCRHLG RPAPQKISRT VFERGRKELL EVPGLGEATV DRLYLAGIYD
AATLRVADPE EVSSVTGIPK ARLRDYIGHL K
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