Gene Memar_0713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_0713 
Symbol 
ID4847990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp692892 
End bp694097 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content63% 
IMG OID640115396 
Productthreonine synthase 
Protein accessionYP_001046628 
Protein GI126178663 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0498] Threonine synthase 
TIGRFAM ID[TIGR00260] threonine synthase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0941717 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACCGTC TCGTCTGCGT TCATTGTGGT GCAACCTACT CACCGGACCA GATCATCTAT 
ACGTGCAACC GCTGCGGACA CCTGCTGACC GTCGAATACG ACCTGGACGG CATCGACGTC
TCACGCGACG AATGGAACCG GCGCCCCCTT TCGGTCTGGC GCTACCGCGA ACTCCTCCCG
GTTCGGGGCG AACCGGTCTC CCTCCAGGAA GGAGGGACCC CGCTCTACCA CTTAAAGAAC
ATCGGTAAGG AACTGGGCCT CTCCGAACTC TACGCAAAAC ACGAGGGGAT GAACCCAACC
GGTTCGTTCA AGGACCGGGG GATGACCGTG GGCGTCAGCA TGGCCTGCGA ACTCGGGATG
ACGACGGTCG CCTGCGCGAG CACCGGGAAC ACCTCCGCAA GCCTCGCTGC CTACGCGGCG
AAGGGAGGAA TTCCGTGTGT CGTCCTCCTG CCCGCGGGGA AGGTCGCCCT CGGGAAGATT
GCCCAGGCGC TGATGCACGG TGCCCGGGTC ATCTCTATCC GCGGCAACTT CGATCGGGCG
CTCGAGATGG TACACGAGCT CTGCATCAGC CACGGCCTCT ACCTCTTGAA CTCGGTCAAT
CCCTACCGGC TTGAGGGACA GAAGACGATC GGGTTCGAGA CGATCGACCA GCTCGGCGGC
GAGGTGCCCG ACCGGATGGT TCTCCCCGTA GGAAACGCGG GCAACATCTC CGCAGTCTAC
AAAGGGCTCC GGGAACTCGA AACCCTCGGA TTCATCGACC GGTTGCCGAT GATGACCGGC
ATCCAGGCTG CCGGCTCACA GCCGGTGGTG AAGGCGATTG AGCAGAACCT CGAGGTGCTG
GTTCCGGAGT CCGCGCCCGA GACGGTTGCG ACCGCGATAC GGATCGGCGC CCCGGTGAAT
GCGGAGAAGG CGCTCGTCGC GATCCGCGCG ACGGGCGGGA CGGCGGCGGC CGTGACCGAC
GAGGAGATCC TTGCCATGCA GCGGGATCTC GCGAGGAAGG AAGGCATCGG GGTCGAACCC
GCCTCGGCAG CCTCGGTCGC CGGAATACGG AAACTTGCCG AACTCGGCCT GATCGATAAA
GATGAGCGGA TCGTCTGCGT GGTGACCGGT CATCTCTTAA AAGATCCTGA AACAGTGGTA
CGACAATGCG AGCCCCCCAC CGAGATCGAC GCGGACCTGC CCTCGCTGCT CTCTGCCTTG
CGCTGA
 
Protein sequence
MYRLVCVHCG ATYSPDQIIY TCNRCGHLLT VEYDLDGIDV SRDEWNRRPL SVWRYRELLP 
VRGEPVSLQE GGTPLYHLKN IGKELGLSEL YAKHEGMNPT GSFKDRGMTV GVSMACELGM
TTVACASTGN TSASLAAYAA KGGIPCVVLL PAGKVALGKI AQALMHGARV ISIRGNFDRA
LEMVHELCIS HGLYLLNSVN PYRLEGQKTI GFETIDQLGG EVPDRMVLPV GNAGNISAVY
KGLRELETLG FIDRLPMMTG IQAAGSQPVV KAIEQNLEVL VPESAPETVA TAIRIGAPVN
AEKALVAIRA TGGTAAAVTD EEILAMQRDL ARKEGIGVEP ASAASVAGIR KLAELGLIDK
DERIVCVVTG HLLKDPETVV RQCEPPTEID ADLPSLLSAL R