| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0638 |
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| Symbol | |
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| ID | 4847932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 608978 |
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| End bp | 609826 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640115320 |
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| Product | apurinic endonuclease Apn1 |
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| Protein accession | YP_001046553 |
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| Protein GI | 126178588 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0648] Endonuclease IV |
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| TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.920931 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGCTGG TGGGATGCCA CGTCTCCATC GCCGGCTCGA TCGACCGTGC GGTCGGGCGG
GCCCTTGACG CGGGCTGCGA TACGTTTCAG ATCTTTTCCC GAAACCCCCG CGGCTGGAAG
GTGAAAGACC TCGACCCGGG CCTGGCCGGG GCCTTCAGGG CGGCGGTGAG TGCGTCGGGG
ATCGGCCCGG TCGTCGACCA CATGCCCTAC CTCCCGAACC CGGCCTCGCC CGATGCCGAG
ATCTACGAAA AATCGGTCGC GGCGCTTGCC GGGGAACTCC GGCGGTGCTC TCTCCTCGGG
ATACCTTACT TGGTGACCCA CCTCGGGCAC CACCGCGGCG CCGGGATGGA AGCGGGGCAG
GAGCGGGTCG TTGCCGCCAT CAACCGGGCG TTTGAAGACG CCGGGGAGAG CGACGTGATG
CTCCTCCTCG AGAACACCGC CGGGGAGAAG AACAGCGTGG GGACGACCGT CGACAACCTC
TCGCGGATCG TGGACGGGAT CGATGCGAAA GAGAGGGTCG GGATCTGTTT CGACACCTGC
CACGCGTTCG CCGCCGGCTA CGACCTCCGG ACCGCGGAGG GGGTCGATGC GGTCTTAGGG
GAGATCGACG ACGCGATTGA TCTATCCCGT CTCCGGGTCG TCCACCTCAA CGACTGCAAG
GGGGATCTCG GGAGCGGGCT CGACCGGCAC GAGCACATCG GGCTCGGGAG GATCGGGGAG
GATGGGTTCC GGCATATCCT CCGCCATCCG GCCGTCCGCC GCCTCCCCCT CATCTGCGAG
ACGCCGGTCG ACGAGCGGCG GAGCGATACC GGGAATATCG CGAAGGTCCG TGAACTTGCA
GGAGCCTGA
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| Protein sequence | MVLVGCHVSI AGSIDRAVGR ALDAGCDTFQ IFSRNPRGWK VKDLDPGLAG AFRAAVSASG
IGPVVDHMPY LPNPASPDAE IYEKSVAALA GELRRCSLLG IPYLVTHLGH HRGAGMEAGQ
ERVVAAINRA FEDAGESDVM LLLENTAGEK NSVGTTVDNL SRIVDGIDAK ERVGICFDTC
HAFAAGYDLR TAEGVDAVLG EIDDAIDLSR LRVVHLNDCK GDLGSGLDRH EHIGLGRIGE
DGFRHILRHP AVRRLPLICE TPVDERRSDT GNIAKVRELA GA
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