Gene Memar_0630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_0630 
Symbol 
ID4846252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp601306 
End bp602199 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content68% 
IMG OID640115312 
Producthypothetical protein 
Protein accessionYP_001046545 
Protein GI126178580 
COG category[R] General function prediction only 
COG ID[COG1571] Predicted DNA-binding protein containing a Zn-ribbon domain 
TIGRFAM ID[TIGR03280] putative methanogenesis marker protein 11 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00298214 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAAAC TCTCTGATCC GTATACGATA CGGTATCCTC AGATCGTGGC GGTGGCCGAC 
GAGAGCGGCG GGCTTGTGGA ACTCGTCGAG TTCTTCGACT GCACCGGCGG CGCGATGTGG
GTGAAGCGGC ACTACGCGCA GAGCCCGCTC GTCCGCTCCG TCCGCACGGT TGGGTCGACC
AACCGCTACC TCCTCTCGAC CGGGAGCGCC GACCTCGCGC TCGAGGGCTC GGTCTTTCCG
GCGGGGATCG CCGCCGTCGC CGTCGAAGAG GGCGAGATTG CCGTCACCTA CCGGGGGCTC
GGCGGCGGAG GCGTGGGGGC GTCGGTCTGC CGTGCCGGGG CCCGCGGTGT CGTCCGCTGC
GTGAGCGACC CGGCCGGCGG CGGGCGACTC GCGGGTTCAA CCGTCTGGCT TCCCCGGCTT
GAGCGGGTGA TCGTCGGGAT CGACGACACC GATACCCCCG AAGAGGGCGC CACCTGGACG
CTCGCGCACA ACATCGCCCG GGCCGTCGAG GACGACCGTT CGCGCTACCT CTCCCACACC
ATCGTTCAGC TCTATCCCGT TCCCTACCGG ACCAAGAACT GCGTCGCCAT CGCCTGCGAG
TTCGCCACTT CCGATCCCGA GGGGCTGATC AGGAACTACC GCGATCTCCT CGAAGAGTAC
ACCCTCTCGG ACGAGACCGG GATGGCGGTC TGGCGGGGGT TCGACCCCTC GCCGCTCGAA
GAATTCGGCT GCCGCGTGAA GCGGGGCGAG GTCTCCGCAG ACGACCTTGC CGCCCTTGAC
TCCGAACATC TCTCCGTCGT CATGGACGGC CGGGGCGTGA TCGGGGCGGT TGCGGCGATC
CCGTTCTATA CACGATACGA GGAGGCGCTG GCGCTATGGA ATGGAAGCGG CTGA
 
Protein sequence
MEKLSDPYTI RYPQIVAVAD ESGGLVELVE FFDCTGGAMW VKRHYAQSPL VRSVRTVGST 
NRYLLSTGSA DLALEGSVFP AGIAAVAVEE GEIAVTYRGL GGGGVGASVC RAGARGVVRC
VSDPAGGGRL AGSTVWLPRL ERVIVGIDDT DTPEEGATWT LAHNIARAVE DDRSRYLSHT
IVQLYPVPYR TKNCVAIACE FATSDPEGLI RNYRDLLEEY TLSDETGMAV WRGFDPSPLE
EFGCRVKRGE VSADDLAALD SEHLSVVMDG RGVIGAVAAI PFYTRYEEAL ALWNGSG