| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0617 |
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| Symbol | |
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| ID | 4846729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 586578 |
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| End bp | 587882 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640115299 |
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| Product | methyl-coenzyme M reductase, beta subunit |
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| Protein accession | YP_001046532 |
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| Protein GI | 126178567 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4054] Methyl coenzyme M reductase, beta subunit |
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| TIGRFAM ID | [TIGR03257] methyl-coenzyme M reductase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000432542 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAAT ACAAGGAAAC TATTGACCTG TACGATGATG CAGGCAAGCA GTTGAAGAGT
GGTGTGCCGC TTGAGAAGAT CAGCCCGCTG GTCAACCCGG CGACCAGGAA ACTCATCGAC
CTCACCAAGA GGACGATTGC AGTCAACCTG GGCGGTATTC AGGAAGGCCT GAAGACCGGA
AAGGTAGCCA AGGGATATGT TCTCGGGCGT GAGATGAACC TCGACATCAT CGGCAACAAG
GATGCCATCA TCGGTAAGAT CAAGGAGATG GTCCAGGTCG AGGAGGGTGA CGACACCAAC
ATCCGCGAGT TCGGCGGCGG CAAGCTCATC CTCGTCGAGG TCCCGAAGAC CCGTCTCGAG
GCTGCATCCA CCTACGACGC CGCGATCACC TCGGTCGCAT CCGCTACCAC CTTCTCGCTC
GTCGAGCAGT TCGACATCGG AGCGTTCGAC GCAGCGATGG TCAAGGCGGC AGTCTGGGGC
GGCTACCCGC ACACGATGGA CCTTACCGGT GCCAACGTCA CGTCCATTCT GTCGATCCCC
CAGAACAACG AAGGTCTCGG CTACGCGCTC CGGAACATCC CGGTCAACCA CGCCGTGATG
ATCACCGGCA AGAACGCTAT GCAGGGCGCC GCACTCTCGT CCACCTTCGA ACAGGCAGGA
ATGTTTGAGA TGGGTAACGC CATCGGACCG TTCGAGCGTG CCCAGCTGCT CACTTACGCT
TATCAGGGCC TGAACGCGAA CAACCTGGTC TATGACCTCG TAAAGAAGAA CGGCGCAACG
GGAACCATCG GCACGGTCGT GCAGAGTCTG GTCGAGCGCG CCATCGAGGA CAAGGTCATC
ACCCCGGGCA AGAAGGGCGG GTACTTCCAG TTCTACAACA CGAAGGACCC CATGCTCTGG
AACGCCTACG CCGCTGCGGG AACCATGGCA GCCACCATGG TCAACTGCGG TGCCGGACGG
TTCGCCCAGG CAGTCTCCTC GACGCTCCTG TACTTCAACG ACCTGCTCGA GCACGAGACC
GGTCTCCCCG GCTGTGACTA CGGCCGTGTC ATGGGTACCG CCGTCGGGTT CTCGTTCTTC
AGCCACTCGA TCTACGGTGG CGGCGGCCCC GGTATCTTCA ACGGTAACCA CGTCGTGACC
AGGCACGCCG CAGGCGTGGC TATCCCGTGC GTGGTCGCTG CGGCGGCACT CGATGCCGGA
ACGCAGATGT TCTCGCCGGA GAGCACATCC AAGGTCTACG GCGACACCTT CGGCCAGGTT
GACGTCTTCA ACAAGCCGAT ACAGCAGATC GCAAAGGGTG TGTAA
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| Protein sequence | MAKYKETIDL YDDAGKQLKS GVPLEKISPL VNPATRKLID LTKRTIAVNL GGIQEGLKTG
KVAKGYVLGR EMNLDIIGNK DAIIGKIKEM VQVEEGDDTN IREFGGGKLI LVEVPKTRLE
AASTYDAAIT SVASATTFSL VEQFDIGAFD AAMVKAAVWG GYPHTMDLTG ANVTSILSIP
QNNEGLGYAL RNIPVNHAVM ITGKNAMQGA ALSSTFEQAG MFEMGNAIGP FERAQLLTYA
YQGLNANNLV YDLVKKNGAT GTIGTVVQSL VERAIEDKVI TPGKKGGYFQ FYNTKDPMLW
NAYAAAGTMA ATMVNCGAGR FAQAVSSTLL YFNDLLEHET GLPGCDYGRV MGTAVGFSFF
SHSIYGGGGP GIFNGNHVVT RHAAGVAIPC VVAAAALDAG TQMFSPESTS KVYGDTFGQV
DVFNKPIQQI AKGV
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