| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0473 |
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| Symbol | tfb |
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| ID | 4847082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 457936 |
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| End bp | 458949 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640115151 |
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| Product | transcription initiation factor IIB |
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| Protein accession | YP_001046388 |
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| Protein GI | 126178423 |
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| COG category | [K] Transcription |
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| COG ID | [COG1405] Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00145549 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGAAG TAGAAAAACT AAAACAGCTG CAGTTGCAGC GCGAGGCCCT GAAGAAGAGA
GGGGAGCAGA AGGTCAAGGA GACGGAGAAG AAGCGCACCG AGGAGAGCGT TCAGTCCGTC
TGCCCTGAGT GCGGCAGCCG CCAGCTCGTC CACGACTACG AGCGCGCGGA ACTCGTATGC
CAGAACTGTG GTCTCGTCCT CGACGAGGAG TTCATCGACC GCGGCCCCGA GTGGCGTGCA
TTCGACCACG ACCAGCGCAT GAAGCGCTCC CGTGTCGGCG CACCGATGAC GTTCACGATC
CACGACAAGG GTCTCTCGAC GATGATCGAC TGGAGGAACC GTGACTCCTA CGGCCGCGCG
ATCTCGAGCA AGAACCGCGC CCAGCTCTAC CGTCTCCGGA AGTGGCAGCG GCGTATCCGT
GTCTCGAATG CGACCGAGCG GAACCTGGCG TTCGCGCTCT CGGAACTGGA CCGGATGGCG
TCTGCGCTCG GCCTGCCCCG GAACGTGCGC GAGACCGCGG CGGTCGTCTA CCGCGACGCG
GTGGACAAGA ACCTGATCCG CGGCCGGAGT ATCGAGGGCG TCGCGGCGGC GGCGCTGTAT
GCGGCATGCC GGCAGTGCAG CGTCCCGAGG ACGCTCGATG AGATCGCCGA GGTATCCCGT
GTATCCCGTA AGGAGATCGG CCGCACCTAC CGGTTCATCT CCCGCGAGCT CGGGTTAAAG
CTCCTGCCGA CGTCCCCGAT CGATTACGTA CCGCGCTTCT GCTCGGGCCT GAACCTGAAG
GGTGAGGTCC AGAGCCGTGC GGTCGAGATC CTTCGGCAGG CCGGCGAGCG CGAACTTACG
AGCGGCAGAG GCCCGACGGG CGTCGCGGCG GCCGCCATTT ACATCTCGTC GATCCTCGGC
GGAGAGCGGC GCACCCAGCG CGAAGTCGCC GAGGTTGCGG GCGTGACCGA GGTCACGATC
AGGAACAGAT ATAAGGAACT GGCAGAAAAA TTAGATATCG AGATCATACT CTGA
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| Protein sequence | MAEVEKLKQL QLQREALKKR GEQKVKETEK KRTEESVQSV CPECGSRQLV HDYERAELVC
QNCGLVLDEE FIDRGPEWRA FDHDQRMKRS RVGAPMTFTI HDKGLSTMID WRNRDSYGRA
ISSKNRAQLY RLRKWQRRIR VSNATERNLA FALSELDRMA SALGLPRNVR ETAAVVYRDA
VDKNLIRGRS IEGVAAAALY AACRQCSVPR TLDEIAEVSR VSRKEIGRTY RFISRELGLK
LLPTSPIDYV PRFCSGLNLK GEVQSRAVEI LRQAGERELT SGRGPTGVAA AAIYISSILG
GERRTQREVA EVAGVTEVTI RNRYKELAEK LDIEIIL
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