| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0403 |
|---|
| Symbol | ileS |
|---|
| ID | 4847697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | - |
|---|
| Start bp | 385609 |
|---|
| End bp | 388788 |
|---|
| Gene Length | 3180 bp |
|---|
| Protein Length | 1059 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640115078 |
|---|
| Product | isoleucyl-tRNA synthetase |
|---|
| Protein accession | YP_001046318 |
|---|
| Protein GI | 126178353 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0060] Isoleucyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00392] isoleucyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.171836 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAGAGG TCACCGGCAG TTATAACCCG CGCGAACTTG AGGCGGGGGT CCAGGATACC
TGGAAACGGG AGAACACCTA TGCACGCGTT CAGGAGGTGC GAAAGGATGG GAAAGCGTTC
TTTTTCGTAG ACGGGCCGCC GTACACCACC GGCCACATCC ATCTCGGCAC CGCCTGGAAC
AAGATCATAA AAGACACCAT CCTCCGCTAC CACCGGATGG GGGGCAGGAA CATCATCGAG
CGGGCCGGCT ACGATATGCA CGGCCTCCCT ATCGAGGTGA AGGTGGAGCA CCAGCTCGGG
TTCACCTCCA AGAAGGATAT CGAGGATTAC GGAATCGCCG CATTCATCGA GCAGTGCCGG
ACGTTCGCCG TGACGCACAT GGAGATTATG AGCGAGCAGT TCCGGCAGCT CGGCATCTGG
CTCGACTTCG ACGACCCCTA CCAGACGATC AAGGCGGAGT ACATCGAGTC CGCGTGGTGG
GCGGTCCAGC GGGCCGAAGA GCGCGGGCTC CTCGAACGCG GCCACCGTGT CGTGAACTGG
TGCCCCCGGT GCGAGACGGC GATCGCCGAC TCGGAGGTGG AGTACTGGGA CGAGACCGAT
CCTTCCATCT TCGTCAAATT CCCGGTCACC GGGCGCGAGA ACGAGTACCT GGTGATCTGG
ACGACCACGC CCTGGACGCT TCCTGCGAAC GTCGCGGTGG CGGTCAGCCC CGCATTCACC
TACGCGCGGG TGGCGGCGAA GAAGGACGGC AGCGAGGAGA TTCTCTGGAT CGCCGACGAA
CTCGTCGAGT CCGTCCTGAA GATGGGCCGC TACCAGGACT ACACCGTCCT CGAGAGAGTC
AACGGCAGCG ACCTCGTCGG AACGGAGTAC GAATCACCGC TCGCCGGCCA GGTCCCCCAC
CAGGCGGAGA TCCGGCACCG GGTCGTCGCG GCCGACTACG TGGCGCTCGA GAACACCGGT
CTCGTCCACA TCGCTCCCGG GCACGGGTGG GACGACTACC TGATCGGCAT CCAGGAGGGG
CTCGAGGCGT TCTGCCCGGT CGACGCCGGC GGGTGCTTCA CCCGGGAGGC CGGGGCGTTT
GCGGACATGT ACGTCCGGGA CGCAAACGAT CTCGTCATCG ACGCGCTCGG CGATTACCTC
CTCGCCCGGC GGACAATCAC CCACCGCTAC GGCCACTGCT GGCGGTGCAA GACCTCCATC
ATCTACCGCG CGACCGCACA GTGGTTCCTG AAGGCCACCG AGATCCGCGA ACCGATGCTA
CAGGAGATCG CGAAGGTGAA GTGGTACCCC GAGTGGGCGG GGAGCGCCCG GTTCCACGAC
TTCGTCAGGG ACTCCCGCGA CTGGTGCATC TCCCGGCAGC GCTACTGGGG CATCCCCATC
CCTATCTGGC AGTGCGAGCA GTGCGGCGAG CGAACCGTCA TCGGCACCAT CGCCGAACTC
GAGGAGCGAT CGGGTGCGAG GGTTCCCGAC CCGCACCGCC CCTACGTGGA CGAGGTCGTC
ATCCCGTGCT CCTGCGGCGG GGAGATGCAC CGGGTCGCCG ACATCTTCGA CGTCTGGTTC
GACTCGGCGG TCGCATCGTG GGCAACCCTC GGGTTCCCGC GGGAGCGCGA GGCCTTCGAC
CGCCTCTGGC CGGCGGACTT CATCACCGAA GGCCAGGATC AGACCCGGGG CTGGTTCTAC
TCCCAGCTCG GGGCGAGCAC CGTGGCGTTC GGCCGCGCCC CCTACAAGAG CGTCCTGATG
CATGGGTTCG CTCTCGACGC CGACGGGCGC AAGATGAGCA AGAGTTTCGG CAACGTGGTG
ACGCCTGAAG AGGTGATGAA CCAGTTCGGC GTGGATGTCC TGCGGTTCTA CGTCCTCTGG
GCGAACGCAC CCTGGGACGA CCTGAAGTTC AACTGGGACA GCGTCAAGAC CATCCACCGG
ACGCTCAACA TCCTCTGGAA CGTCTACCGG TTCCCGCTCC CGTACATGGT TCTCGACTCG
TTCGAGCCCG CCGCAGGCGA CGGCGGCCTC TGGGACGGAT CGTTTGTCCG GGGCAATATC
AACGATATGC CGGAGGAGGA TCGGTGGATC ATCTCCCGGG TAAACTCACT CGCCCGGACT
ACGGCCGGGG ACATGCAGGA ATACCATCTT CATAGGGTGA CGCGGGCGCT CGCCGCCTTC
ATCCTCGAGG ACCTCTCCCG CTGGTACGTG CAGCTCGTCC GGCCGAGGAT GTGGCTCGAG
GAGGATTCGC CGGAGAAGCG GTACGCCTAC GAGACGGTAT ACTACGTCAT GCGCCGCCTG
GTCGCGCTCC TTGCGCCGTT CACCCCCCAT ATCGCCGAGG AGATTTACGG CAACCTGCGC
CTTGCGGGCG ACCCGGAGAG CGTCCACATG CTCGACTGGC CGGAAGCGGA CGACCTGCTG
ATTGCGCCGG ACCTCGAGAG CGCCATGGAG GTTGTCCGGT CGTTCGACGA CGCGGTCGCC
ACCGCCCGGC AGAACGGGAG GCGGAAACTC CGCTGGCCGG TTGCGGAAAC CGTCGTGGTC
ACCGGGAGCG ACGGGGTGAA GACGGCTCTC GAGGACTTAA ACGACCTCGC CCTGAACCGG
GCGAACTCCC GGACGGTCAG GGTCGTTACC GGAAGATGGG ACCGGATCCT CTGGCAGGCC
GAGCCGGTGA TGCGGGCGAT CGGCCCGGAG TTCGGCAAGG AGGGCCCGAA GGTCAAGGCG
CTGATAGAGG GCGCGGACGG CACCGCCCTG AAGGCCGCCA TCGAGCGGGA CGGGAAGGCC
GAACTCGGCG GCTACGAGAT CGCCGAACGC CACGTCACCT TCGCAGAAGC CCTCCCCGAG
GGCGTCTTTG CCGCGCCCAT GAAGGACGCG ACGGTCTACG TCGACGTCAC CCTCACGCCG
GCGCTGGAGG CCGAGGGATA CGCACGCGAG GTGATCCGGC GGATCCAGGA GATGCGCCGC
CAGCTCGACC TGAACGTCGA CGACTTCATC GTCGCGGCCG TGGACGTCGC CGACGATCGG
GTGGCCTCGC TCATCGCAGA AGAGGAATGG CAGAAGGAGA TTGCCGGGGA GGTGCGGGCG
GCAGCCCTCA CCGTCCGCCG CACCGACGGA GAGCGGCCCA CGGAGACCTT TGCCCTCGAG
AAGGACTGGG ACGTTGAAGG CGTGCAGATG CAGATCGGCA TCTCACGCGC CGGTGAGTGA
|
|---|
| Protein sequence | MKEVTGSYNP RELEAGVQDT WKRENTYARV QEVRKDGKAF FFVDGPPYTT GHIHLGTAWN
KIIKDTILRY HRMGGRNIIE RAGYDMHGLP IEVKVEHQLG FTSKKDIEDY GIAAFIEQCR
TFAVTHMEIM SEQFRQLGIW LDFDDPYQTI KAEYIESAWW AVQRAEERGL LERGHRVVNW
CPRCETAIAD SEVEYWDETD PSIFVKFPVT GRENEYLVIW TTTPWTLPAN VAVAVSPAFT
YARVAAKKDG SEEILWIADE LVESVLKMGR YQDYTVLERV NGSDLVGTEY ESPLAGQVPH
QAEIRHRVVA ADYVALENTG LVHIAPGHGW DDYLIGIQEG LEAFCPVDAG GCFTREAGAF
ADMYVRDAND LVIDALGDYL LARRTITHRY GHCWRCKTSI IYRATAQWFL KATEIREPML
QEIAKVKWYP EWAGSARFHD FVRDSRDWCI SRQRYWGIPI PIWQCEQCGE RTVIGTIAEL
EERSGARVPD PHRPYVDEVV IPCSCGGEMH RVADIFDVWF DSAVASWATL GFPREREAFD
RLWPADFITE GQDQTRGWFY SQLGASTVAF GRAPYKSVLM HGFALDADGR KMSKSFGNVV
TPEEVMNQFG VDVLRFYVLW ANAPWDDLKF NWDSVKTIHR TLNILWNVYR FPLPYMVLDS
FEPAAGDGGL WDGSFVRGNI NDMPEEDRWI ISRVNSLART TAGDMQEYHL HRVTRALAAF
ILEDLSRWYV QLVRPRMWLE EDSPEKRYAY ETVYYVMRRL VALLAPFTPH IAEEIYGNLR
LAGDPESVHM LDWPEADDLL IAPDLESAME VVRSFDDAVA TARQNGRRKL RWPVAETVVV
TGSDGVKTAL EDLNDLALNR ANSRTVRVVT GRWDRILWQA EPVMRAIGPE FGKEGPKVKA
LIEGADGTAL KAAIERDGKA ELGGYEIAER HVTFAEALPE GVFAAPMKDA TVYVDVTLTP
ALEAEGYARE VIRRIQEMRR QLDLNVDDFI VAAVDVADDR VASLIAEEEW QKEIAGEVRA
AALTVRRTDG ERPTETFALE KDWDVEGVQM QIGISRAGE
|
|---|
| |