Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0402 |
Symbol | |
ID | 4846999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 384892 |
End bp | 385626 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640115077 |
Product | hypothetical protein |
Protein accession | YP_001046317 |
Protein GI | 126178352 |
COG category | [S] Function unknown |
COG ID | [COG4021] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.156853 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATACGA AAGACCGTGA GATATTCTCG ACCCTCACGA TATTCCCCCC TGTTTTTGTC CGGCTCGACG GCCGTGCCTT TCACCGCCTG GCGCGTGCGC GTAATCTCAA AAAGCCGTTC GATCCAGCCT TCAACGAGAG CATGCGGGCG GTCTGCCGCT ACCTCCTCAC CGGGAGCGGT CTCTCTCCCG CGTTTGCCTA CACCTTCTCC GACGAGATCA GCCTCTACTT CAACGCACTG CCGTTCTCCG GGCGGGTGGA GAAGCTCGAC TCCGTGACCG CCGCGGTTGC GGCGAGCAAG CTCACGATCG AACTCGGGTG CACGGAGCCC CTTGCGTTCG ACGCCCGGAC TATCCCCGCG GCGGGAGAGT TTGCGGTCGA GTATCTCGTC TCGCGCCAGA ACGAGGCGTG GCGGAACCAC ATCAACGCCT ACTGCCAGAA CGCGCTCGTC GAGGAGGGGA TGACCGCCCG GGAGGCCGCC GCGATGCTCC GGGGGATGCA GTCTGAAGCC ATGCACGAGA TGATGTTCGA GCGGGGCGTC AACCTGGCGG CGACGCCGGC CTGGCAGCGG CGGGGAACGC TCCTCTACCG GGACGAGTGC ATAAAAGAGG GGTATAACCC CCTGACGGGG GAGACCGTCG AGGCCGTGCG AACCTGCATC AGGGAGCCGG AAGAGACGCC TCTCTTCTCA ACCCCGGAAG GTGAGGCGCT GATCCGGTCA CTCACCGGCG CGTGA
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Protein sequence | MDTKDREIFS TLTIFPPVFV RLDGRAFHRL ARARNLKKPF DPAFNESMRA VCRYLLTGSG LSPAFAYTFS DEISLYFNAL PFSGRVEKLD SVTAAVAASK LTIELGCTEP LAFDARTIPA AGEFAVEYLV SRQNEAWRNH INAYCQNALV EEGMTAREAA AMLRGMQSEA MHEMMFERGV NLAATPAWQR RGTLLYRDEC IKEGYNPLTG ETVEAVRTCI REPEETPLFS TPEGEALIRS LTGA
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