Gene Memar_0402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_0402 
Symbol 
ID4846999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp384892 
End bp385626 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content64% 
IMG OID640115077 
Producthypothetical protein 
Protein accessionYP_001046317 
Protein GI126178352 
COG category[S] Function unknown 
COG ID[COG4021] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.156853 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATACGA AAGACCGTGA GATATTCTCG ACCCTCACGA TATTCCCCCC TGTTTTTGTC 
CGGCTCGACG GCCGTGCCTT TCACCGCCTG GCGCGTGCGC GTAATCTCAA AAAGCCGTTC
GATCCAGCCT TCAACGAGAG CATGCGGGCG GTCTGCCGCT ACCTCCTCAC CGGGAGCGGT
CTCTCTCCCG CGTTTGCCTA CACCTTCTCC GACGAGATCA GCCTCTACTT CAACGCACTG
CCGTTCTCCG GGCGGGTGGA GAAGCTCGAC TCCGTGACCG CCGCGGTTGC GGCGAGCAAG
CTCACGATCG AACTCGGGTG CACGGAGCCC CTTGCGTTCG ACGCCCGGAC TATCCCCGCG
GCGGGAGAGT TTGCGGTCGA GTATCTCGTC TCGCGCCAGA ACGAGGCGTG GCGGAACCAC
ATCAACGCCT ACTGCCAGAA CGCGCTCGTC GAGGAGGGGA TGACCGCCCG GGAGGCCGCC
GCGATGCTCC GGGGGATGCA GTCTGAAGCC ATGCACGAGA TGATGTTCGA GCGGGGCGTC
AACCTGGCGG CGACGCCGGC CTGGCAGCGG CGGGGAACGC TCCTCTACCG GGACGAGTGC
ATAAAAGAGG GGTATAACCC CCTGACGGGG GAGACCGTCG AGGCCGTGCG AACCTGCATC
AGGGAGCCGG AAGAGACGCC TCTCTTCTCA ACCCCGGAAG GTGAGGCGCT GATCCGGTCA
CTCACCGGCG CGTGA
 
Protein sequence
MDTKDREIFS TLTIFPPVFV RLDGRAFHRL ARARNLKKPF DPAFNESMRA VCRYLLTGSG 
LSPAFAYTFS DEISLYFNAL PFSGRVEKLD SVTAAVAASK LTIELGCTEP LAFDARTIPA
AGEFAVEYLV SRQNEAWRNH INAYCQNALV EEGMTAREAA AMLRGMQSEA MHEMMFERGV
NLAATPAWQR RGTLLYRDEC IKEGYNPLTG ETVEAVRTCI REPEETPLFS TPEGEALIRS
LTGA