Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0400 |
Symbol | |
ID | 4847249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 383398 |
End bp | 384534 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640115075 |
Product | CBS domain-containing protein |
Protein accession | YP_001046315 |
Protein GI | 126178350 |
COG category | [R] General function prediction only [T] Signal transduction mechanisms |
COG ID | [COG1994] Zn-dependent proteases [COG3448] CBS-domain-containing membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0735736 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGCGT CGCTACAGAT CGGAACCCTG GCCGGGATTC CGGTCAAACT GCACTGGAGT TTCCTCCTGG TGATCCCCCT CTTTGCATGG ATCATCGGAA GCCAGATCCA GCTCACGACC GGATTGATCG AGGCTCTCTT CGGCGTTCCA ATCGACCCGA CGCTGATTAC GGAGGGGTTC AACCCCTACA TCCTCGGGAT CGTCGTCGCG CTCGGCCTCT TCTTCGGTGT CTTCATCCAC GAGATGGCCC ACTCGCTCAT CGCGAAAGCG AAGGGGATCG AGATCCACAG CATCACGCTC CTCATCCTCG GAGGGGTCTC CCAGATGGAG GAGACGATGC CGGACCCGAA GATCGAACTG CCCATGGCGC TCGCGGGGCC GCTGACGAGC CTCGCGGTCG GCATCATCTC CGCCGCCCTC GTCTATGTCG TTGCGGCGAT CGATATGGAT CCGGGTGTCG CCGGTGTCCT GATCTTCACC TTCGGCTACC TCGGGCTCCT GAACGTCCTG CTCTTCGGAT TCAACCTCCT CCCGGCGTTT CCCATGGACG GGGGGCGCGT GCTGCGGGCA TGGCTCGCCC GGCGGATGCC GCTCTCCCGG GCGACCCGGA TCGCCGCCGA CGTCGGGAAA GGGTTCGCCG TCCTCTTCGG GATCGTCGGG CTCCTGCTCC TGAACCCCAT CCTGATCATC ATTGCCTTCT TCATCTACAT CGGGGCGAAC CAGGAGGCCA CGTTCCTCCG CTACAACATC CTGCTGCAGG ACGTCACGGT GGCGGACGCG ATGAGCAGCC CCGTCGTCAC CGTGGAGCCG ACGCTGCCGC TACCCCGTGT GGTGGACATG ATGTACGAGA CGAAGCACCT CGGCTTTCCG GTGGTGGATA GGGGATCGCT CGCGGGGATC GTCGCTCTCG CCGACGTCCA CAAGATCTCG CCGATCGACC GGGAGGCGAT GCAGGTCCGG GACGTCATGA CCCGGGATCC GACCGTTCTC CCGCCGTCGG CACCGCTCAT CGACGCGCTC CGGATCATAA CCGGCCAGGA GATCGGGAGG ATTCCCGTCG TCGAGGACGA CACCCTGGTC GGGATCGTGA CCCGGACGGA CGTTCTGCGG GTGATGGAAC TGCGGGAGGA GGAGTAG
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Protein sequence | MEASLQIGTL AGIPVKLHWS FLLVIPLFAW IIGSQIQLTT GLIEALFGVP IDPTLITEGF NPYILGIVVA LGLFFGVFIH EMAHSLIAKA KGIEIHSITL LILGGVSQME ETMPDPKIEL PMALAGPLTS LAVGIISAAL VYVVAAIDMD PGVAGVLIFT FGYLGLLNVL LFGFNLLPAF PMDGGRVLRA WLARRMPLSR ATRIAADVGK GFAVLFGIVG LLLLNPILII IAFFIYIGAN QEATFLRYNI LLQDVTVADA MSSPVVTVEP TLPLPRVVDM MYETKHLGFP VVDRGSLAGI VALADVHKIS PIDREAMQVR DVMTRDPTVL PPSAPLIDAL RIITGQEIGR IPVVEDDTLV GIVTRTDVLR VMELREEE
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