| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0385 |
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| Symbol | |
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| ID | 4846170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 364246 |
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| End bp | 365106 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640115059 |
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| Product | transcription activator, effector binding |
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| Protein accession | YP_001046300 |
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| Protein GI | 126178335 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG4978] Transcriptional regulator, effector-binding domain/component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGTCG ATCAGATCCC TATCGGCACG TTCTCGCGAA TCACGCACCT GTCGCAGAAA
GCGCTCCGCC TCTACGACGA GCGGGGGCTC CTCGTCCCCG CGGCAAGAGA CATCTGCACG
GGGTACCGCT ACTATACTTA CGACCAGATT GAGCGGGGCA TCCGTATCCG AAACCTGCTC
TGGCTCGGGT TCGGCCTCTC CGAGGTGGAG GCCATCCTCG AGGCACGGGA ACGTGGCGAT
GCCGCGATGA TCCAGGAACA CTTTGCACGG CGTCTCGCTG AGAACGAACG GGAGGCCGGC
CGGCTGCATG CGATTGCAGG GGCCCTGCGC AAACAGCAGC AGGACCCGTT CAACGGAGGA
TTCAGTATGT CGATTACCGA ACCTGTTATC AAGGATATCC CCACCGTGCG GGCGCTCAGC
CTCAGGGAGC GGGGTATCTA CCAGGAAACG ATCCCGAGAA TGATCCGGGA ACTCTTCACG
TACGTCTGTC CTGAAGACGG ACGGCAGCCG GCTGCAAGGA TCGCCGGGCC GATCATGTTC
ATCTGCCATG ACGAGGAGTA CCGGGAGACA GACGCGGACA TCGAGGTGGC GGTCCCGATC
ACAGGGTCCG TCAGCCTCGA CGGAACCGCC GTCGAGGTCG TGAACCTTCC GGGCGGCCGG
TTCCTCTCGG TACTCCACAC GGGCCCCTAC CCCGGGGTCG GGAAGGCATA CGAGCGGCTC
TTTTCCTACA TGAACGAGCA CCGCCTCGTG CCGTCCGGCC CCTCGCGTGA ACTCTATCTC
AACGACCCCG CCGAGGTGCC GGAGGAGGAA CTCCTGACCG AGGTCCAGTC CCCGGTAAAA
GACCTTCCCC CGTCCCCCTG A
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| Protein sequence | MPVDQIPIGT FSRITHLSQK ALRLYDERGL LVPAARDICT GYRYYTYDQI ERGIRIRNLL
WLGFGLSEVE AILEARERGD AAMIQEHFAR RLAENEREAG RLHAIAGALR KQQQDPFNGG
FSMSITEPVI KDIPTVRALS LRERGIYQET IPRMIRELFT YVCPEDGRQP AARIAGPIMF
ICHDEEYRET DADIEVAVPI TGSVSLDGTA VEVVNLPGGR FLSVLHTGPY PGVGKAYERL
FSYMNEHRLV PSGPSRELYL NDPAEVPEEE LLTEVQSPVK DLPPSP
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