| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0362 |
|---|
| Symbol | |
|---|
| ID | 4847677 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | - |
|---|
| Start bp | 341525 |
|---|
| End bp | 342007 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640115036 |
|---|
| Product | NADH ubiquinone oxidoreductase, 20 kDa subunit |
|---|
| Protein accession | YP_001046277 |
|---|
| Protein GI | 126178312 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3260] Ni,Fe-hydrogenase III small subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.547425 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTCC TGAAGCGATC GCCCTGGATC CTTCACTACG ATGCGTCCAG CTGCAACGGG
TGCGACATAG AGGTTCTTGC ATGCCTCACC CCGCTCTACG ATGTGGAGCG GTTCGGTATG
ATCAACACCG GGAACCCGAA GCACGCAGAT ATTCTGCTGA TCACCGGCGG AATCAACACG
CAGAACCGGG AGGTGGTCGA AAACATCTAC GAGCAGATGC CGGAGCCGAA AGTCGTCATT
GCAGTTGGTG TTTGTGCCGC AACCGGCGGC ATATTCCGGG AGTGTTACAA CATCGTGGGG
GGCATCGACA AGGTTATCCC CGTGGATGTC TACGTTCCGG GATGCGCGGC AAGGCCGGAA
CAGATCATCG ACGGTGTCGT AACAGCGCTT TCGATCCTCG AGAAGAAACG AGCGGCGATG
GCGGGGACGG CGCAGACAAA AGAAGAAGAG CAGCACGCGG AACAGGCAGG TGAGAGCACA
TGA
|
|---|
| Protein sequence | MAFLKRSPWI LHYDASSCNG CDIEVLACLT PLYDVERFGM INTGNPKHAD ILLITGGINT
QNREVVENIY EQMPEPKVVI AVGVCAATGG IFRECYNIVG GIDKVIPVDV YVPGCAARPE
QIIDGVVTAL SILEKKRAAM AGTAQTKEEE QHAEQAGEST
|
|---|
| |