| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0313 |
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| Symbol | |
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| ID | 4846721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 291357 |
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| End bp | 293171 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640114987 |
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| Product | DNA-directed RNA polymerase subunit B' |
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| Protein accession | YP_001046228 |
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| Protein GI | 126178263 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR03670] DNA-directed RNA polymerase subunit B |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACAGT CACGTGTCTT CGTTGACGGA GCCCTTATCG GGCTTGTGGA CGACCCGCGG
GAACTGGTCG AGCGGATGCG CGAAATGCGC CGGCACGGCG AGATCTCCTC CGAGGTCAAC
GTATCCTACA AGGACTTCAA CAACGACGTC ATCATCCATA CCGATCGCGG CAGGGCACGC
CGGCCGCTGA TCGTGGTCAA AGGCGGTGTT CCGCAGGTAA CCGACGACGA TATCGAGCGT
CTCCGAAACG GCGAGACAAT CTTCGAGGAC GTGGCGCGGA AGGGCGCGAT CGAGTTCGTC
GACGCCGAAG AGGAGGAAGA CCTCTTCATC GCCATCAACG AGGCGGACCT CACCCCCGAG
CACACGCATC TCGAGATCGA TCCCTCGCTC ATCCTGGGTA TCGGTGCGGC GCACGTCCCG
TTCCCCGAGC ACAACGCCAG TCCCCGTGTC ACCATGGGTG CCGGGATGGT CAAGCAGGCG
CTCGGCTTTG CGGCATCGAA CATGAAACTC CGCCCCGACA CCCGGGGACA CATGCTCCAC
TACGGCCAGA AGCCGCTCAC CTTCACCCAG ACATCCGATG TGATCGGCTC CGACGATCGG
CCCGCGGGCC AGAACTTCGT CGTCGCCATC ATCTCGTATG AAGGGTTCAA CATTGAGGAT
GCGCTGATCA TCAACAAGGC CTCCATCGAC CGCGGCCTCG GGCGTTCGCA CTTCTTCCGC
ACCTACGACG GCGAAGAGCG GCGATACCCC GGCGGCCAGG TCGACCGGAT CGAGATCCCG
GACGAAGAGG TCTCCGGCGC GCACGGTGCC GAGTTCTACG CGAACCTGGA CATCGACGGC
GTCATCAACC CCGAGACGGT CGTCCGCGAG AAAGACGTGC TGATCGGCAA GACCTCCCCG
CCCCGGTTCC TCGAAGAGCC TACGAGCGAG TTGATCGCCG TCGAAAAACG GCGCGACACC
TCGGTCACGA TGCGGAGCAA CGAGCACGGT ATCGTGGACA CCGTCATCAT CACCGAGGGC
GAGAACTCCT CGCGCCTGGT GAAGGTCAGG ACCCGTGACC TCCGGGTGCC GGAGGTCGGC
GACAAGTTCG CTTCCCGGCA CGGTCAGAAG GGCGTCATCG GGCTGATCCA GCCTTCGGCG
GATATGCCGT TCACCGAGTC GGGCATGACG CCCGACCTGA TCATCAACCC CCACGCCGTC
CCGAGCCGTA TGACCATCGG GCACATGCTC GAGATGCTGG GCGGCAAGGT CGGCTCGCTC
GAAGGGCACC GGATCAACGC GACCGCGTTC CGCGGCGAAC GCGAGACGGC TCTGCGGAGT
TCACTCAAAG AACTCGGTTT TTCGCACAAC GGCCGCGAAG TCATGTACGA CGGTATCACC
GGCCGGCAGT TTGCGGCCGA CATCTACATC GGCGTCATCT ACTACCAGAA ACTCTACCAC
ATGGTATCGA GTAAGATGCA CGCGCGGTCG CGCGGCCCCG TGCAGGTGCT CACCCGCCAG
CCGACCGAAG GACGTGCCCG CGAGGGTGGT CTCCGGTTCG GTGAGATGGA GCGGGACGTG
ATGATCGGCC ACGGCGCGGC CATGGCCTTA AAAGAACGTC TCCTCGATGA GTCGGACAAG
GTGACCCAGT GGGTCTGCGC GAAGTGCGGT ATGGTGGCGA TGGTCGACCG GAAGAGGAAG
GTGACGCGGT GCCTTGCCTG CGGCGGTGAG ACCGATATCT ACCCTGTCGA GATGAGCTAC
GCATTCAAGC TCCTCCTCGA CGAGATGAAG AGCATGGGCA TCGCTCCCCG CCTGAGACTC
GACGATATGG TGTAA
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| Protein sequence | MRQSRVFVDG ALIGLVDDPR ELVERMREMR RHGEISSEVN VSYKDFNNDV IIHTDRGRAR
RPLIVVKGGV PQVTDDDIER LRNGETIFED VARKGAIEFV DAEEEEDLFI AINEADLTPE
HTHLEIDPSL ILGIGAAHVP FPEHNASPRV TMGAGMVKQA LGFAASNMKL RPDTRGHMLH
YGQKPLTFTQ TSDVIGSDDR PAGQNFVVAI ISYEGFNIED ALIINKASID RGLGRSHFFR
TYDGEERRYP GGQVDRIEIP DEEVSGAHGA EFYANLDIDG VINPETVVRE KDVLIGKTSP
PRFLEEPTSE LIAVEKRRDT SVTMRSNEHG IVDTVIITEG ENSSRLVKVR TRDLRVPEVG
DKFASRHGQK GVIGLIQPSA DMPFTESGMT PDLIINPHAV PSRMTIGHML EMLGGKVGSL
EGHRINATAF RGERETALRS SLKELGFSHN GREVMYDGIT GRQFAADIYI GVIYYQKLYH
MVSSKMHARS RGPVQVLTRQ PTEGRAREGG LRFGEMERDV MIGHGAAMAL KERLLDESDK
VTQWVCAKCG MVAMVDRKRK VTRCLACGGE TDIYPVEMSY AFKLLLDEMK SMGIAPRLRL
DDMV
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