Gene Memar_0261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_0261 
Symbol 
ID4846234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand- 
Start bp239021 
End bp239656 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content72% 
IMG OID640114932 
Productthiamine-phosphate pyrophosphorylase 
Protein accessionYP_001046177 
Protein GI126178212 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0352] Thiamine monophosphate synthase 
TIGRFAM ID[TIGR00693] thiamine-phosphate pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.243144 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGATACG ACCTCTACGT AGTCACCGAC GAGACGATCG GGCGCGGACG CACTCACACG 
GATCTCGCCC GCCTCGCCGC CGCCGGCGGC GCGGACGTGA TCCAGCTCCG TGACAAGAGG 
CTCCCGGGCC GCGACCTCCT CAGCGCGGCC GTAGCCATAC GTGAGATCAC CACTGACGCC 
GGCGCGCTCT TCATCGTGAA CGACCGCCTG GACGTCGCCA TCGCGGCCGG TGCCGACGGG 
GTCCACCTCG GCGCAAACGA CCTCCCCGTG GGCGAGGCAC GGCGCATCGT CCCGCCGGGG 
TTCCTCATCG GGGCATCGGT CGGGTCGGTC GCCGCGGCTG TCCGGGCCGC GGCGGAAGGG 
GCCGACTACG TGGCGCTCAG CCCGACGTTT GCGACCGGGT CAAAGGACGA CGCGGGGCCG 
GGGTGCGGGC TTGCCGCACT CAAAGAGATC CGTGCCGCGG TATCCCTCCC GCTCGTCGCG 
ATCGGGGGGA TCACCGCAGC AAACGTCGCC GACGTCATCG CCGCGGGGGC GGACGGCGTC 
GCGGTGATCT CGGCGGTCGT GGGAGAGGGC GACGTCACCG CCGCCGCACG GAGCCTCCGC 
GACCGGATCG CCGCCGCGAA AGCGGAAGGC CGTTAA
 
Protein sequence
MGYDLYVVTD ETIGRGRTHT DLARLAAAGG ADVIQLRDKR LPGRDLLSAA VAIREITTDA 
GALFIVNDRL DVAIAAGADG VHLGANDLPV GEARRIVPPG FLIGASVGSV AAAVRAAAEG 
ADYVALSPTF ATGSKDDAGP GCGLAALKEI RAAVSLPLVA IGGITAANVA DVIAAGADGV 
AVISAVVGEG DVTAAARSLR DRIAAAKAEG R