Gene Memar_0238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_0238 
Symbol 
ID4848207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp215610 
End bp217904 
Gene Length2295 bp 
Protein Length764 aa 
Translation table11 
GC content65% 
IMG OID640114909 
ProductCheA signal transduction histidine kinases 
Protein accessionYP_001046154 
Protein GI126178189 
COG category[T] Signal transduction mechanisms
[K] Transcription
[N] Cell motility 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases
[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGGAC CGGACGACGT ATTTCGTGCC CGTCTCCTCG AGACGTTCCG CGAGGAGGCG 
GACGAGTACC TTGAAGCAAT CACCGAGGGG CTGATCGCGC TGGAGAAGGC CGGGCCGACG
CCCGAGCTGG TCGAGCGGGT TTACCGGACG GTCCATAGCC TGAAAGGAGC GTCGCGCGCG
GTCAATCACC GGGAGATCGA GTCGATCTGC CAGAACCTCG AGACCGCCTT CTCCCTCATG
AAGCGGGGCG AGTACGTCCC GGGAGTGGAC GATTTCGACC TCTTCCACCG GACAGTCGCG
GTCATCAAGA GCCTTCTCCG GGGAGAGAGG CCCGATGCCT CGCCGACAGA GATCAACGGG
GCACTCCGGG CCATCCCCGG CGGGACCGGT CCTCCGGAAG GCCGGCCGGG CGAACCGGGT
CCGGCCTCCC GGGAGAAACA CACTTACGAC GCGCCAGGAG GTTATAACAG CGGCGAGCAG
GGGGCCGACC GGGGCACGGT GCGGATTGCC GCCCATAAAC TCGACCGGCT CACCGCAGGA
GCCGACAGTC TCCTCACGAC CCGGCTCTTC ATCACGCAAC GGATACGCGA GCTCGAGGAG
ATGATGGCCC GTTTCTCCCT CTGGCAGTGG AACCACTCCC AGGCGTTCAA CGACCTGCAG
ACGATCCGCA GGAAGGCCTT CGGGGAAGAG AAGGCAGCCA TTCCTCCCGA TCTCGTCCTG
CCGCTCCAGC GGGCGGTCGA GTTCCAGGAG TACAACCGCG AGTTCGTGAC CAACCTGCAG
CACGACCTCG CCACGCACCT GCGGTCCATG GAGTTCGACC GGTCGGCGCT CGAGACGAGC
ACCTCCGAGA TATCCGACCT TGTCCACGAT GCCGCACTCC TCCCGGCTTC AACCATACTT
ACCCCGTTCT CCGCGTTCGT GAGAGAGTTT TCCCGCACCT CGGGGAAATC GGTCGACCTC
ACGATCGAGG GGGGCGAGAT CGAGGTCGAC CGCCGTATCC TCGATGCGTT GAAAGACCCC
ATCATGCACC TCATCAGGAA CAGCATCGAT CACGGCATCG AGAGCCCGGA GGCCAGGAGA
GCCCGGCAGA AATCCGCCAC AGGCTCCGTG CGGATCCGGG TCTTCCCCCG GTCGGGGAGC
AGGGTCGGCA TCGAGGTGGC CGACGATGGC GCCGGCGTCG ACAGTAGCGC GATCCGGAGA
ACCGCCGTCG AGAACGAGGT GATCACGGCG GACGAGGACG CAACCCTCAC CGACAGCGAG
GCAATCTGGC TCATCTTCCG GTCGGGGATG ACCACGAGCC GGATCGTCAC CGACCTCTCG
GGGAGAGGGC TCGGACTTGC AATCGTTGAA GACACCGTCT CCCGTCTCGG GGGGGAGGTG
ACGGTCTCCT CGACCGTCGG CAGGGGGACG GCGATCACCC TGACCGTCCC GGTGAGTATG
GCCACCCTCC GCGGGCTGCT CGTCCGCTCC GAACGGCAGG TATATGTCCT CCCGATGCAG
CAGGTGAAGC AGGTTCTCCG GGTTCGCCCG GATTCCCTGG CCGTCTCCAG GGGCCGGCCG
ACGATCCTTC TGTCGGGAGA GACAATCGAG GTCATCCGGC TCACCGACGC CCTGGGTATC
CCCCTGTCCG GCCCCCCCAC GGAGGAGGGG CAGCCAAAAC CCCTCGTCAT CATCGCATAC
GGGGCCGGGC AGATCGCGTG TATAGTCGAC GAAGTGATCC GGGTGCAGGA GATCGTCGTC
CGGCCGCTCG GCAGTCAGCT CACCTCCGTG CGACGGATCG ACGGGGCCGT GATCCTCGGG
GACGGGCGTC TGGCGCTCGT GCTCGATCCC CTCGACCTGA TCCAGGACGC GATGCAGGCG
GAGCGGCCGG TTTCGGCATC CACACTTCCA CAGGAGGCAG AGCGGCGGGT CATGGTCGTC
GAGGACTCGG TCACCTCACG TGCCCTGCTG CAGGCCGTCC TCGAGGGGGC CGGATATCAG
GTGGAGACCG CTGTCAACGG GATCGACGCA TTCGCAAGGC TTAAGCAGCA TGAGTTTGAT
ATGGTCGTTT CAGATGTTGA TATGCCTCGG ATGAACGGTT TTACGCTCAC CGAGAAGATA
CGTGCCGAGG GCGGGCACCT TGCCGGGATC CGGGTGGTGC TGGTCACTTC GCTCGATTCG
CCCGAAGACC GGGAACGGGG AAAGGCGGTC GGGGCGGATG CATATATCGT CAAGAAGAGC
TTCGAGGCAG ACGAGTTTCT CAGGATAATC CGGCGTCTGG TGCGTCGCCG CGAGGGAGAG
ATCCAGGAGC GATGA
 
Protein sequence
MTGPDDVFRA RLLETFREEA DEYLEAITEG LIALEKAGPT PELVERVYRT VHSLKGASRA 
VNHREIESIC QNLETAFSLM KRGEYVPGVD DFDLFHRTVA VIKSLLRGER PDASPTEING
ALRAIPGGTG PPEGRPGEPG PASREKHTYD APGGYNSGEQ GADRGTVRIA AHKLDRLTAG
ADSLLTTRLF ITQRIRELEE MMARFSLWQW NHSQAFNDLQ TIRRKAFGEE KAAIPPDLVL
PLQRAVEFQE YNREFVTNLQ HDLATHLRSM EFDRSALETS TSEISDLVHD AALLPASTIL
TPFSAFVREF SRTSGKSVDL TIEGGEIEVD RRILDALKDP IMHLIRNSID HGIESPEARR
ARQKSATGSV RIRVFPRSGS RVGIEVADDG AGVDSSAIRR TAVENEVITA DEDATLTDSE
AIWLIFRSGM TTSRIVTDLS GRGLGLAIVE DTVSRLGGEV TVSSTVGRGT AITLTVPVSM
ATLRGLLVRS ERQVYVLPMQ QVKQVLRVRP DSLAVSRGRP TILLSGETIE VIRLTDALGI
PLSGPPTEEG QPKPLVIIAY GAGQIACIVD EVIRVQEIVV RPLGSQLTSV RRIDGAVILG
DGRLALVLDP LDLIQDAMQA ERPVSASTLP QEAERRVMVV EDSVTSRALL QAVLEGAGYQ
VETAVNGIDA FARLKQHEFD MVVSDVDMPR MNGFTLTEKI RAEGGHLAGI RVVLVTSLDS
PEDRERGKAV GADAYIVKKS FEADEFLRII RRLVRRREGE IQER