| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0221 |
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| Symbol | sdhA |
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| ID | 4848195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 200465 |
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| End bp | 202096 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640114891 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_001046137 |
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| Protein GI | 126178172 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.143686 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATGTAG ACGAGATTGT GGACGCGCAT GTGCTGGTTG TCGGAAGCGG CGGCGCCGGG
GTGCGGGCCG CCATCGAGGC CTCCCGGTAC GGCGGCGTGG TCATGGTCTC CAAGACCATC
GCCGGCAAAG GCGGGTGCAC GACGATGGCG GAAGGCGGCT ACAACGCCGT GCTGCGGGAC
CGGGACTCGG TCGACGTCCA CCGCGAGGAT ACGCTCTCGG GCGGGGCGTA TCTCAACGAC
CCGGCACTCG TGGACGCGCT GGTCCGCGAG GCCCCCGAGC GGATGGCGGA CCTTGTCCGG
TGGGGCGCCG TCTTCGACGT CACGGAGGCG CGAGAGGTCG CGCAACGGCC GTTCGGCGGC
CAGCGGTTCC CCCGGACCTG CTACGCCGGG GACCGGACCG GCCACGAGAT GATCATGACC
CTCCTCGACC GGCTCGACGC GACCGATACG CACCTCTACC AGGAGGTCTC GGTCGTCGAC
TTCGTCAAGG ACGAGAACGG GGCGGTCGCC GGCGCGATTG CTCTCGACCG GGACGGAGAC
GTCGTGCTCT TCCGCTCCGA CGCGACGGTG CTCGCGACCG GCGGAGGGAC GCAGGTCTAC
GATATATCCA CGAACTCCGC CGCCGGAACC GGGGACGGGT TCGCGATGGC CTACCGGGCG
GGGGCGGAGC TGATCGATAT GGAGATGATC CAGTTCCACC CGACCGGGGC GGTCTACCCC
TACGACGCCC GTGGCCGCCT GGTGACGGAA GCCGTCCGGG GCGAGGGAGG ACTTCTCCTG
AACGCGCGGC GGGAGCGGTT CATGGAGCGC TACGACCCCG AGCGGATGGA ACTCTCCACC
CGGGACGTGG TTGCGCGGGC GATCGCGACC GAAGTGCTGG AGGGCCGGGG GACGGGCCGC
GGCGGGGTCT ACCTGGACGT GACCCACCTC CCGGCAGAGA CGATCGAGAC ACGGCTTCCG
GTGATGCTCG AACAGTACCT CGCCTACGGC GTGGATATCC GGCGGGAGCC GATGGAGGTG
GCCCCGACCG CCCACCATAT CATGGGCGGG GTCAGGATCA CCCCGGAGTG CCGGACGACC
ATCCCCGGCC TCTTCGCCTG CGGCGAGGTT ACCGGCGGGG TGCACGGCGC AAACCGCCTC
GGGGGGAACG CCCTCGCGGA CACGCAGGTC TTCGGAAAGC GGGCCGGGGA GTTTGCCGGG
AAGGCGCCCG CACGGAGCGG CCGGATCGAT CCCGCCCGGA TCGATGAGGT GACCCGGATG
CTCGGCGGAT TCTACGAGGG GGCAATAAGC CCCGCGGATG TCAGGAAGGA CCTGAAACTC
ACGATGTGGA ACCAGGCCGG AATCTTCCGG AGCGCCCCCG ACCTCCGGAC GGCGCTCGGG
CACGTTCGCC GACTTGCCGA CAAACGGCTC TGCGCCGCCT CGACCGTGAA CCTGCTTGAA
TGCTGCACCG TCCGGAACAT GTGCACCACG GCATCCCTGA TCGTCCGGTG CGCCCTCCTG
CGGCCGGAGA ACCGGGGAGC CCACGTCCGG CGGGATGCCG ACGTGGCGAC CGAACCGGCG
ACGTCGCCGT TCTCCCACAC CTACGTCTCG CTCACCCGGG AGGGGATCGA GCGGCGGGAG
GCGGCGGCAT GA
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| Protein sequence | MHVDEIVDAH VLVVGSGGAG VRAAIEASRY GGVVMVSKTI AGKGGCTTMA EGGYNAVLRD
RDSVDVHRED TLSGGAYLND PALVDALVRE APERMADLVR WGAVFDVTEA REVAQRPFGG
QRFPRTCYAG DRTGHEMIMT LLDRLDATDT HLYQEVSVVD FVKDENGAVA GAIALDRDGD
VVLFRSDATV LATGGGTQVY DISTNSAAGT GDGFAMAYRA GAELIDMEMI QFHPTGAVYP
YDARGRLVTE AVRGEGGLLL NARRERFMER YDPERMELST RDVVARAIAT EVLEGRGTGR
GGVYLDVTHL PAETIETRLP VMLEQYLAYG VDIRREPMEV APTAHHIMGG VRITPECRTT
IPGLFACGEV TGGVHGANRL GGNALADTQV FGKRAGEFAG KAPARSGRID PARIDEVTRM
LGGFYEGAIS PADVRKDLKL TMWNQAGIFR SAPDLRTALG HVRRLADKRL CAASTVNLLE
CCTVRNMCTT ASLIVRCALL RPENRGAHVR RDADVATEPA TSPFSHTYVS LTREGIERRE
AAA
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