Gene Memar_0175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_0175 
Symbol 
ID4846073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp157984 
End bp160422 
Gene Length2439 bp 
Protein Length812 aa 
Translation table11 
GC content67% 
IMG OID640114845 
Productoligosaccharyl transferase, STT3 subunit 
Protein accessionYP_001046091 
Protein GI126178126 
COG category[R] General function prediction only 
COG ID[COG1287] Uncharacterized membrane protein, required for N-linked glycosylation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCCCG CTGCACTGAA AGATCATAAA ACGGCCCTCA CCGCCGCCGC CCTGCTCGTC 
TTCATGCTCG TGGCGGTTCT CCTCCGCGCA ATCCCCCACG CCGCGCTCGT CGACGGCTCG
TTCACCACCC TCATCGGCAC CGACGCCTGG TACAACCTCC GCCAGGTCGA GGTGATCGCG
GCAAACTACC CCGGCTACGC CTGGTTCGAT CCCATGACCG CCTACCCGGG GGGTAAAGAG
ATCGCCTGGG GGCCGCTCTT CCCGCTCATC ACCGCCACCC TCTGCCTCGT CGCCGGGGCG
GCCGCCCGGC CCGAGATCGT GTACGTCGCC GCGTGGGTCC CCCCGCTCCT CGCGGCCGCC
GTCGTCCCGG TCGTCTACCT CACCGGAAAG ACCCTCGCCG ACAGGACGAC CGGGCTCGTC
GCCGCCGGGC TCATCGCGGT CGTCTCGGCC TCGTTCTTCG CGCGGTCGAT CTTCGGGTTC
GTCGATCACC ACGTTGCGGA GACGCTCTTC TCCACCCTCT TCTGCCTCGC CTACATCGCC
GCGCTCGCGT ACGCCGCCCG GCACCCGGTA ACGCTTGCGG ACACAAAGAC CATCCTCCCC
GTCGCGCTCC TCGCCCTCGC CGCCGGGGCC GCCTACGTCC TCGGCCTCCT CGTCATGCCG
ACGATCATCC TCTTCGCGCT CATCGCCGGG ATCTTCACGG TCATCCAGGC CGTGCGGAAC
CACCTCGACG GCACCGGGCC GGAGGGGCTT TTAGTCGTCA ACGCCGTCAC GTTCGCTCTT
CCCGCAATCT TCCTGCCCAT ATCCGGGTTC ATGGTCGACT CGATGTCGCT CTCGCTCTAC
TCCGTCGCCC ACGTCTACGC CTACCTCCTC CTGATCGCCG TGACCGCCCT CCTCGCCGGC
ATCTCGCTGG CGCTCAAAGG AAAGCGGCGC GAGTACCTCG CCGCCCTTGC CGCGCTCGGA
GTTGCCGGCG TTGCCTTCCT CACGCTCTCC GATATCGGGA AGACGATGGC AAACGGCCTT
GCGGCGTTCT TCGGCCGCGA CATGACGGCC ACCGCCATCC GGGAGATGGG GGCCTGGGAT
CTCTCCCTCG CGTGGCAGAG CTTCAACGTC GGCCTCCTCC TCATCCCCGC CGGACTTGCC
GTGCTCGCCC TCCGGGCCCG GCGCGAGAAC CGGCCGGAGG TCCTCTTTAC GATCGTCTGG
TCGGTCGTCA TCCTGATCGC GACCATCCAG CACCTGCGGT TCGAGTACTA CCTCGCCGTG
AACCTCGCGC TCCTCGCCGC GGTCGTCGTC GCGTGGGCGC TCGACTACGG ATTCGAGAAG
ACGGCCGATT ACCTCCGTGA GCCCGAGAGC AAAAAGAAGA AGAAAGCGCT TCCCACCGCC
GAGATCGCCG CCGTCGGGAT CGCCGTCCTC CTCGCCGTGA TCCTCGTCGG CGCATCGGCC
TCGGAAAACA TCGGCTACGC GCAGAACGGC GTTCCCCGCA CCATGCTCGC CGACGACTGG
CGCGACGCCC TCGAGTGGAT GAACGTAAAC ACCCCCGACC CCGGGGTCGA TTACTACGCC
ATCTACGAGA AGGATGGCTT CGCCTATCCC GAGAACTCCT ACAGCGTCAT GTCCTGGTGG
GACTACGGCC ACTGGATCAC CTTCATCGCC CAGCGGATCC CGGTCACCAA TCCCTTCCAG
GACAACGTCC GCAGCGCCAC TGGGTTCTTC CTCGCGACGA GTGAAGAGAA GGCCGACGCG
GCCGGCTCCC GCTACATCGT CACCGACGGC AGGATGGCCG CCGAGGGGTT CCCGGCCATC
GCCTACTGGC ACGACGCGAC GACGGGAACC ACGCCCTACG CAATGCCCCT CCTCGTGGCG
GTGCCGGGAA GAGAGGATAC CTACAGCATC GAGTCGTTCT ACCGGGAGGC CTACTACGAG
ACGATGACGG TCCGGCTGCA GGCCTTCGAC GGCACGCTCG TAGAGCCCGA GAACGCGCTC
TACGTCGAGT ACGACACCAG GTCGGTCCCG GAGACCGGGT ATCCGCTCCT CACCGGGAGC
AAAGAAATGA GCCCGGCAGA GGCGCAGGCG GCGGCCGACG CCTACACGGG ACCGGGTAAG
GCCGCGGTCT TCGGGAGCGA TTCCGCGAGC CCGGCCGGGA CCGTCCCGGC GCTCAGGCAC
TACCGGCTCG TCTACGAGTC CTCGCCGGAC CCCGCGACGA GCGTCAAGAT CTTCGAGCGC
GTCGAGGGCG CCGCGATCCC GGGCGAGGGC GTCATCGAGG CCACGGTCGT CACCAACACC
GGCCGGGAGT TCGTCTACCG GCAGGCAAGC GAGGACGGGA CGTTCGTCGT CCCCTACTCA
ACGACCGGCA ACCCCTACGA CGTGAAGACG GTCGGAGGCT ACCGGATCGG GAACAAGGAG
ATCACGGTGA CCGAGGAGGC CGTGACGGGA GTAGCGTAG
 
Protein sequence
MAPAALKDHK TALTAAALLV FMLVAVLLRA IPHAALVDGS FTTLIGTDAW YNLRQVEVIA 
ANYPGYAWFD PMTAYPGGKE IAWGPLFPLI TATLCLVAGA AARPEIVYVA AWVPPLLAAA
VVPVVYLTGK TLADRTTGLV AAGLIAVVSA SFFARSIFGF VDHHVAETLF STLFCLAYIA
ALAYAARHPV TLADTKTILP VALLALAAGA AYVLGLLVMP TIILFALIAG IFTVIQAVRN
HLDGTGPEGL LVVNAVTFAL PAIFLPISGF MVDSMSLSLY SVAHVYAYLL LIAVTALLAG
ISLALKGKRR EYLAALAALG VAGVAFLTLS DIGKTMANGL AAFFGRDMTA TAIREMGAWD
LSLAWQSFNV GLLLIPAGLA VLALRARREN RPEVLFTIVW SVVILIATIQ HLRFEYYLAV
NLALLAAVVV AWALDYGFEK TADYLREPES KKKKKALPTA EIAAVGIAVL LAVILVGASA
SENIGYAQNG VPRTMLADDW RDALEWMNVN TPDPGVDYYA IYEKDGFAYP ENSYSVMSWW
DYGHWITFIA QRIPVTNPFQ DNVRSATGFF LATSEEKADA AGSRYIVTDG RMAAEGFPAI
AYWHDATTGT TPYAMPLLVA VPGREDTYSI ESFYREAYYE TMTVRLQAFD GTLVEPENAL
YVEYDTRSVP ETGYPLLTGS KEMSPAEAQA AADAYTGPGK AAVFGSDSAS PAGTVPALRH
YRLVYESSPD PATSVKIFER VEGAAIPGEG VIEATVVTNT GREFVYRQAS EDGTFVVPYS
TTGNPYDVKT VGGYRIGNKE ITVTEEAVTG VA