| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0077 |
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| Symbol | trpA |
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| ID | 4846047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 71937 |
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| End bp | 72749 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640114748 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_001045994 |
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| Protein GI | 126178029 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCCGGA TCGACGCCCT CTTTGCCCGG AGCCCGGCCT TCATCGGGTT CACCGTTGCC
GGAGACCCCG GCATCGAGGC TTCGCTCCGG GTGGCGAAGG CGATGATCGA AGCGGGCGTG
GACCTCCTCG AGATCGCGAT CCCCTACTCC GATCCGGTGG CGGACGGTCC CGTGATCGAA
CGGGCGCACG TCCGTGCCCT CCGGGCGGGG ACGACCACGG ACGACGTCTT CGCCCTTGTC
CGGCGCATCC GGGAGCACGC GCCGGCGCTC CCCCTCGTCC TCTTCACCTA CCATAACATC
ATCCACCGCC GGGGGCCGGA CCGGTTCTTT TCGGAGGCCG CGGCCGCCGG CGCGGACGGC
GTTCTCATCG TCGACCTCCC CGTCGAGGAG TCGGGCGAGG TCGCGCCCTG CGCCGCCCGA
TACGGCATCG ACCGGATCGC CCTCATCGCC CCGACGACGT CGCCGGAGCG GCAGCATGCG
ATCCTTTCCG GAGCATCCGG GTTCGTCTAC CTGATCTCGC TCGAGGGGGT GACCGGCGAG
CGCGACCGCC TCCCCCCCGG TATCGCCGGG CTGGTCGGCG CGGTGCGGGA GAAGACCGGT
CTTCCTCTCG CCGTCGGGTT CGGGGTCTCG CGCCCGGAAC ACGTCCGGAC CGTCGTCGCC
GCCGGCGCGA ACGGCGTCAT CGTGGGGAGC GCGCTCGTCC GGCTGATCGA GGAGCACGCG
GGCGACGAGG CCGGGATGCA GGATGCCCTC CGGGCGGCGA TAGCCGCCCT CCGGCGCGGG
CTCGTCCCCG ACCCCGAACC TGATATACCC TGA
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| Protein sequence | MSRIDALFAR SPAFIGFTVA GDPGIEASLR VAKAMIEAGV DLLEIAIPYS DPVADGPVIE
RAHVRALRAG TTTDDVFALV RRIREHAPAL PLVLFTYHNI IHRRGPDRFF SEAAAAGADG
VLIVDLPVEE SGEVAPCAAR YGIDRIALIA PTTSPERQHA ILSGASGFVY LISLEGVTGE
RDRLPPGIAG LVGAVREKTG LPLAVGFGVS RPEHVRTVVA AGANGVIVGS ALVRLIEEHA
GDEAGMQDAL RAAIAALRRG LVPDPEPDIP
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