Gene Memar_0056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_0056 
Symbol 
ID4848047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp53098 
End bp54228 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content67% 
IMG OID640114727 
Productaminotransferase, class V 
Protein accessionYP_001045973 
Protein GI126178008 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACACG AACCACTCCT GATGATCCCG GGCCCGGTAC CCATTCCGCA GCGGGTACGC 
GCCGCCATGA CGCGGCAGGC CATCAACCAC CGCGGCCCCG AGTTCGGCGC CGCATATGCG
GACACTGTCC GGACCTTAAA GACCCTATTC GGCACCGCAA ACGAGCTCTA TATTATCAGC
GGCTCGGGAA GCGCCGGCAT GGAGGCCGGC GTCGCGAACT TTGCGCGGGA CAAACGAATC
GTCTCGCTCG TTAACGGCAA GTTCGGCGAC CGCTTCGCCA AGATCAGCGC ACGTTACGGC
ACCGTCACCA CCCTCGAGTC CGGGTGGGGA ACCCCGCTCG ATCTCGCGGC CCTCGAGCGG
GAACTCGAGG CCGGTGCCGA GGTCGTCACC ATGGTACACA ACGAGACGAG TGCCGGGATC
AGGAACCCCG CGCCCGAGGT CGGTAAACTC GCCCGGAAGC ACGACGCGCT CTTCATCATG
GACGGAGTCA CCTCCATCGG CGGCGACGAT GTCCGGATGG ACGAGTGGGG CGTCGATATC
GCCGTCGTCG GCTCGCAGAA GTGCCTCGCG GCCCCCGCGG GCCTCGCGGC CATCGCCGTC
GGCGAGCGTG CCTGGGACCG GATCTCGGAG AAGCGGCCGT TCTACCTCGA TATGGCTGCC
TACCGGAAGA GCGGGAGCGG CACCCCGATG GAGACCCCCT ACACCCCGGC GGTCCCGCTC
TTCCTCGCGC TCTGCGAGGC CTGCAAGATC ATCGAGGAAG AAGGCATCGA TGCCCGGATC
GCCCGCCACC GCCGGATGAC CGAAGCCGTC CGCGCCGCGG CGAAGGGCTG GGGCGTCGAA
CTCTTCCCGG AGCTCGATGA ATACCACGCC TACTCGAACA CCGTGACCGC GATGCGGCTC
CCCAAAGGTG TCACCGACAA GGATCTCCGG GGAACCGTCA AGCAGTTCGG CATCGAGATC
GCCGGCGGCC AGGACCACCT CAAGGGCAAG ATCTTCCGGA TCGGTACCAT GGGCGGCGTC
GGGGCGCAGG AGATCCTCGC CACCCTCGCG GCCGTCCAGT TCGCCCTGAA AAAGTCCAAC
GTTGCGGCCG GCGACGGTGT CGAGGCCGCT GCCGGGGTGC TGCTCGGATG A
 
Protein sequence
MEHEPLLMIP GPVPIPQRVR AAMTRQAINH RGPEFGAAYA DTVRTLKTLF GTANELYIIS 
GSGSAGMEAG VANFARDKRI VSLVNGKFGD RFAKISARYG TVTTLESGWG TPLDLAALER
ELEAGAEVVT MVHNETSAGI RNPAPEVGKL ARKHDALFIM DGVTSIGGDD VRMDEWGVDI
AVVGSQKCLA APAGLAAIAV GERAWDRISE KRPFYLDMAA YRKSGSGTPM ETPYTPAVPL
FLALCEACKI IEEEGIDARI ARHRRMTEAV RAAAKGWGVE LFPELDEYHA YSNTVTAMRL
PKGVTDKDLR GTVKQFGIEI AGGQDHLKGK IFRIGTMGGV GAQEILATLA AVQFALKKSN
VAAGDGVEAA AGVLLG