Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0048 |
Symbol | |
ID | 4846600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 47667 |
End bp | 48770 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640114719 |
Product | radical SAM domain-containing protein |
Protein accession | YP_001045965 |
Protein GI | 126178000 |
COG category | [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily [TIGR03551] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTGTA TGCCGCCGCC ACTGCGAGAG ATACTTGACG ACGTGCTTGC CGGCCACCGG CTCACGGAAG AGGAGGCGGT CCGCCTCCTT GCGACGCGCG ACCGGGGCGT CTGGGAAATT GCCGCCGCCG CGAACGAACT CCGCGAGCGG AAAGTCGGCA ACGTCGTCAC CTACGTCCGC AACCAGAACA TCAACGTCAC CAACCTCTGC GTGAACGCCT GCGGGTTTTG CGGATTCTCC CGAAAGCCGG GCGACGCCGA TGCCTTCTTT TACGGCGAGA CCGCGGTGCG GGGGAAGGCG CGGGAGGCGC GCGAGCGCGG CGTTACCGAG GTCTGCACGG TGAGCGGGCT CCACCCGGAG TTCGACGTCC AATCCTACGC CGAGATCTAC TCCTGGATAC GGGACGAGGT TCCGGGAGTA CATATCCACG CGAGCAACCC GATGGAGGTG GCATATGCCG CGAGAAGGAG CGGCATCTCC ACCCGGGAAG TGATGGAACT GATGAGGGGC GCGGGTCTCT CCACCCTCTG CGGTACCGCG GCCGAGATCC TGGTCGACGA TGTTCGTCGG GTGATCTGTC CCGACAAGAT TGACACGGGG TCCTGGGCCC GGATCATCAG AGAGGCGCAT GGTCTCGGCA TCCGGTCGAC GGCGACGATC ATGTACGGCC ACTGCGAGAG CGAGGCGGAT CGCGCCCGGC ATCTTAACAT CCTCCGCGAG ATCCAGGACG AGACCCACGG GTTCACGGAG TTCGTGCCCC TCTCGTTCAT CCACAAAAAT ACCCCTCTCT ACCGGGCGGG GCTCGCCCGG GCGGGGGCGA CCGGCAGAGA AGACCTCCTG ATGTTTGCGG TCGCCCGGCT CTTCCTCGAC AACTTCGACC ACATCCAGGC TTCCTGGGTG AAGGTCGGGA CGAAGATGGC GGAGATGGCG CTTCTTTCGG GTGCAGACGA CCTCGGCGGG ACGCTCTTCG AGGAGAGCAT ATCCCGGGAA GCGGGCGCCC GGGATACCGA TTATCTGGAT CCGGCCGAGA TGCGGCGGAT GGCCGAGGAT CTCGGCCGGG TACTCCGCCA GCGGACGACG ACCTATGCTC TTCTTCCGGG CTGA
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Protein sequence | MKCMPPPLRE ILDDVLAGHR LTEEEAVRLL ATRDRGVWEI AAAANELRER KVGNVVTYVR NQNINVTNLC VNACGFCGFS RKPGDADAFF YGETAVRGKA REARERGVTE VCTVSGLHPE FDVQSYAEIY SWIRDEVPGV HIHASNPMEV AYAARRSGIS TREVMELMRG AGLSTLCGTA AEILVDDVRR VICPDKIDTG SWARIIREAH GLGIRSTATI MYGHCESEAD RARHLNILRE IQDETHGFTE FVPLSFIHKN TPLYRAGLAR AGATGREDLL MFAVARLFLD NFDHIQASWV KVGTKMAEMA LLSGADDLGG TLFEESISRE AGARDTDYLD PAEMRRMAED LGRVLRQRTT TYALLPG
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