| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0009 |
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| Symbol | |
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| ID | 4848259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 6696 |
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| End bp | 7592 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640114680 |
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| Product | pyridoxal biosynthesis lyase PdxS |
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| Protein accession | YP_001045926 |
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| Protein GI | 126177961 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
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| TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTCG AGGAACTGAG ATTTGGCACC GAGCTGATCA AGCGCGGCTT TGCGTCGATG
CAGAAGGGCG GCGTCATCAT GGACGTCGTC AACGCAGAGC AGGCGCAGCT CGCCGAAGAG
GCCGGTGCCG TCGCCGTCAT GGCGCTTGAG AGAGTCCCTG CCGATATCAG GGCGGCCGGT
GGCGTGGCCC GTATGGCCGA CCCACAGAAG ATCGTCGAGA TCATCGATGC TGTCTCCATC
CCGGTGATGG GGAAGGCCCG GATCGGCCAC TTCGTCGAGG CGCAGATGCT GGAAGCCCTC
GGCGTGGACA TGGTCGACGA GAGCGAGGTC CTGACCCCGG CCGACGAGCA GTTCCATATC
GATAAGACCG GTTTTGGTGT CCCGTTCGTC TGCGGCGCCC GGAACCTCGG GGAGGCGCTG
CGCCGTATCA ACGAGGGAGC GGCGATGATC CGGACGAAGG GCGAGGCCGG CACCGGCAAC
GTCGTGGAGG CGGTCCGCCA CATGCGGGCG ATCATGGGCG GGATCCGGGC GCTGAAAGGC
CTCTCCAGCC AGGAGCTCGT CGACTGCGCC CGAGATATCG AGGCGCCCGT GGAACTCGTC
ATCGAGTGCG CACAGCGCGG CCGCCTCCCC GTGGTGAACT TCTCCGCGGG CGGGATCGCG
ACGCCTGCCG ACGCGGCGCT GATGATGCAG CTCGGCGCCG ACGGGGTCTT CGTCGGGTCG
GGCATCTTCA AGTCCACGAA CCCCGAGGCG ACCGCCCGGG CGATCGTGGA GGCGGTCAAC
CACTACGACG ACGCAAAGGT CATCGCCGAA GTAAGCAGGG GCCTTGGGGC TGCGATGAAG
GGCCTCGACG TCCATCTCCT CCGCGAAGAC GAGGTGCTGC AGACCCGTGG GCGTTAA
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| Protein sequence | MKLEELRFGT ELIKRGFASM QKGGVIMDVV NAEQAQLAEE AGAVAVMALE RVPADIRAAG
GVARMADPQK IVEIIDAVSI PVMGKARIGH FVEAQMLEAL GVDMVDESEV LTPADEQFHI
DKTGFGVPFV CGARNLGEAL RRINEGAAMI RTKGEAGTGN VVEAVRHMRA IMGGIRALKG
LSSQELVDCA RDIEAPVELV IECAQRGRLP VVNFSAGGIA TPADAALMMQ LGADGVFVGS
GIFKSTNPEA TARAIVEAVN HYDDAKVIAE VSRGLGAAMK GLDVHLLRED EVLQTRGR
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