Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0002 |
Symbol | |
ID | 4846223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 1757 |
End bp | 2248 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640114673 |
Product | AsnC family transcriptional regulator |
Protein accession | YP_001045919 |
Protein GI | 126177954 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.355793 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGAAA AGGACCGTAT CCTCCTCCAT CTCCTGGAGG AGAACTGCCG CACCCCCGTA AGCGAACTCG CGGTGCTGGC CGAGATGAGC GAGCAGGACG TGAAGGATCG GATCGGCCGG CTGGAAGTGG CAGGCGCCAT CCGCCGCTAC GGGGCGGTTG TCGACTGGGA GCGGGCCGGC GACGGAAACG TCGCTGCAGT GCTCGAACTC AAAGTCTCGC CCGAGCGGGA CTTCGGCTAC GACCGGATCG CCGAGCGGAT CACCCGGTTC CCGCAGGTCC GGTCGCTCCG CCTGATGACT GGCGCGTACG ACCTTCAGAT CCTGGTCACC GGGCCGAGCA TGCACGAGAT CGCGCGGTTC GTCTCCGAGC AGATCGCCCC GATGGACCGG ATCCGGGAGA CGGCGACGCA CATCATCATG AAGACCTACA AGGAGAACGG CACCACCTTC GCCGAGCGCG AAGAGGTCGA GCGGCTCCCC TACTCATTCT GA
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Protein sequence | MDEKDRILLH LLEENCRTPV SELAVLAEMS EQDVKDRIGR LEVAGAIRRY GAVVDWERAG DGNVAAVLEL KVSPERDFGY DRIAERITRF PQVRSLRLMT GAYDLQILVT GPSMHEIARF VSEQIAPMDR IRETATHIIM KTYKENGTTF AEREEVERLP YSF
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