| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3979 |
|---|
| Symbol | |
|---|
| ID | 4898184 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009050 |
|---|
| Strand | + |
|---|
| Start bp | 1120523 |
|---|
| End bp | 1121215 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 640114582 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001045829 |
|---|
| Protein GI | 126464716 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0086043 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGCC TGACCCTCAC GACCTGCGCC CTGGCGCTCG CCGGAGCCAC CGCCGCCCAT
GCCGACTGTG CTGCGGACCT TGCATCCCTG ACCGGCGCGT CCGCCGACAT GCCGTCCGCG
AGCGGGGCCG CTGCGGATAG CGGATCCACC ACGGGCGCTT CGGGAACGGA CGCGGCCGGC
TCCGACATGA GCACGACCGG TTCGGCTGCC GGAGGCTCCG ACATGGCGGC GGGGTCGGGT
GCCGCCGGCA CCTCAGGCTC CGCGATGACC GGCAGCTCCG ACATGGCCGG CGGGTCTTCC
TCCACGGGTT CCGGCTCGGG CAGCGGGACC GACATGGCGG GCTCCGGTGC AACGGGCTCG
GGCACGACCG GCACGAGCGC CACCGGCCCC GGGACCGCCG GATCGGACGG CGCTTCGGGC
ATGGCCGAAG GCGAGGGCAT CTCGAAGGAC GGCTCGCTCG CGCCGCTGGA GGGCGCCGAC
GGCAGCGGGA GCAACAGCGC GACCACGGCC ATGTCCGGCG CCGATGCCGC AGCCCAGCAG
AACGGCGAGC CGACGGCGGC CCAGTCCGCC GAGGTCGGAT CGGGGGAGGG CGCGAACACC
CGCGCCGGCG CCATTCAGGA AGCCCGCACC GCTCTTGCCC GGGGCGACGA GGCGGCCTGC
CTCGCGGCCG TCGAGAAGGC CCGCGGCCTC TGA
|
|---|
| Protein sequence | MKRLTLTTCA LALAGATAAH ADCAADLASL TGASADMPSA SGAAADSGST TGASGTDAAG
SDMSTTGSAA GGSDMAAGSG AAGTSGSAMT GSSDMAGGSS STGSGSGSGT DMAGSGATGS
GTTGTSATGP GTAGSDGASG MAEGEGISKD GSLAPLEGAD GSGSNSATTA MSGADAAAQQ
NGEPTAAQSA EVGSGEGANT RAGAIQEART ALARGDEAAC LAAVEKARGL
|
|---|
| |