| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3970 |
|---|
| Symbol | |
|---|
| ID | 4898915 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009050 |
|---|
| Strand | + |
|---|
| Start bp | 1110595 |
|---|
| End bp | 1111602 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640114573 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001045820 |
|---|
| Protein GI | 126464707 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAGAT TCCTCCTCGG CAAGCTTGCC TATCTGATAC CGACCTTCCT CGGCATCACC
ATCGTGGCCT TCGGCTTCGT GCGGCTCCTG CCGGGCGATC CGGTGCTGCT CCTGGCGGGC
GAACGCGGCA TCACGCCCGA GCGTCACGCC GAACTTTCGG CCCAGCTCGG CTTCGACCGA
CCCATCTGGG TGCAGTATTT CGACTTCCTC GGAAACCTGT TTCAGGGCGA CTTCGGCCTG
TCGCTGACCA CCAAGAAGCC GGTCCTGACC GAGTTCCTGA CGCTGTTTCC GGCGACGGTC
GAGCTCGGAC TGGTGGCGGT CACGCTCGCC ACGCTGATCG GCATTCCGCT GGGTGTCTTC
GCCGCCATCA AGCGCGGCAG CTGGTTCGAC CAGATCTCGA TGGGCACGGC GCTCGTGGGC
TATTCGATGC CGATCTTCTG GTGGGGGCTG CTGCTCATCA TCTTCTTCTC GGGCATCCTG
AAATGGACCC CGGTCTCGGG GCGAATCGAC CTGCTCTATT TCTTCCCGAA CGGCACCGGC
TTCATGCTGT GGGATTCGCT CGTCTCGGGG CAGAAGGGCG CCTTCCTCTC GGCGGTGCGC
CACCTGATCC TGCCCGCCAT CGTGCTGGCC ACGATCCCGA TGGCGGTGAT CGCGCGGCAG
TCGCGCTCGG CCATGCTCGA GGTGCTGGGA GAGGACTATG TCCGGACCGC GCGCGCCAAG
GGCATGAGCC CCTTCCGCGT GATCTCGGTT CATGCGCTGA GGAACGCGCT GATCCCGGTG
GTGACGACCA TCGGCCTGCA GGTCGGCGTG GTGATGGCGG GGGCCATCCT CACCGAGACC
ATCTTCTCCT GGCCGGGCAT CGGCAAATGG ATGATCGACT CCATCTCGCG CCGCGACTAT
CCGTCGGTGC AGGGCGGCCT GCTGCTCATG GCGGGCGTCG TGATGCTGGT CAACCTGATC
GTCGATCTCC TCTACGGGGT CATCAACCCC CGCATCCGTC ATTCGTGA
|
|---|
| Protein sequence | MIRFLLGKLA YLIPTFLGIT IVAFGFVRLL PGDPVLLLAG ERGITPERHA ELSAQLGFDR
PIWVQYFDFL GNLFQGDFGL SLTTKKPVLT EFLTLFPATV ELGLVAVTLA TLIGIPLGVF
AAIKRGSWFD QISMGTALVG YSMPIFWWGL LLIIFFSGIL KWTPVSGRID LLYFFPNGTG
FMLWDSLVSG QKGAFLSAVR HLILPAIVLA TIPMAVIARQ SRSAMLEVLG EDYVRTARAK
GMSPFRVISV HALRNALIPV VTTIGLQVGV VMAGAILTET IFSWPGIGKW MIDSISRRDY
PSVQGGLLLM AGVVMLVNLI VDLLYGVINP RIRHS
|
|---|
| |