Gene Rsph17029_3960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3960 
Symbol 
ID4898419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp1098657 
End bp1099601 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content72% 
IMG OID640114563 
Producttransport system permease protein 
Protein accessionYP_001045810 
Protein GI126464697 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4605] ABC-type enterochelin transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATAGGT CGATCCGCTG GCTCGTGCCG ATCTGCCTCG TCGCCGCCGG GCTCTATCTC 
TTCTGGGGGC TCCGGGCGGC GAACTGGGCC TTCGTGCTGG AGCTGCGGGC CACGCGGCTC
GCGGCGCTGA CGGTGGTGGG CGCCTCGGTG GGGGTGGCCA CGGTGCTCTT CCAGACGGTG
AGCATCAACC GCATCCTCAC GCCCTCGATC ATGGGGTTCG ACGCGCTCTA TGTGCTGATG
CAGACCGCGC TGGTGGCGGT TCTGGGCATC TCGGGCTTCG CGGCCCTGCC GGGCGGGCCG
AAGTTCCTGC TCGAGACCGG GGGGCTGGTC GCGGCGGCGC TGCTCCTCTT CGGCACACTC
CTCGCCCGGG GGGCGCAGGA TCTGCCGCGG ATGATCCTGA CCGGCGTGAT CTTCGGGATC
CTCTTCCGCT CGGCTGCGGG CTTCGTGGGC CGTCTGCTCG ATCCGAACGC CTATGCGGTG
GTGCAGCAGG CGAGCTTTGC CACTTTCTCG CGGGTGGAGG CGGGCCTGCT GCCCTGGGCG
GGGCTCCTTG CGCTGTCGGC GATGGGCACG GCACTGGCGC TCGCCCCGCG GCTCGATGTG
CTGGCGCTGG GGCGGCGGAC GTCGGTGCCG CTGGGGCTCG GGCACGACCG GCTCGCGCTT
CTCACGCTGG GGCTGGTGGC GGTGCTGGTC GCCAGCGCCA CAGCGCTCGT GGGTCCGATC
GGCTTCTTCG GGCTGATCGT GGCCTCGCTC GCCCATGCGC TGACCGAGCG GGCGCGCCAT
GCGGCGCTGC TGCCCGCGGC GGCGCTGTCG GCCGTGGCGC TGCTCGTGGG CGGACAGTTC
CTCTTCGAGC GGCTGCTGCG CCTTGAGGGG ACGCTCAGCG TCGTGGTCGA GCTGGCGGGC
GGGCTCTTCT TCCTGTGGCT TCTGATGAAG GGACGGATCC GATGA
 
Protein sequence
MDRSIRWLVP ICLVAAGLYL FWGLRAANWA FVLELRATRL AALTVVGASV GVATVLFQTV 
SINRILTPSI MGFDALYVLM QTALVAVLGI SGFAALPGGP KFLLETGGLV AAALLLFGTL
LARGAQDLPR MILTGVIFGI LFRSAAGFVG RLLDPNAYAV VQQASFATFS RVEAGLLPWA
GLLALSAMGT ALALAPRLDV LALGRRTSVP LGLGHDRLAL LTLGLVAVLV ASATALVGPI
GFFGLIVASL AHALTERARH AALLPAAALS AVALLVGGQF LFERLLRLEG TLSVVVELAG
GLFFLWLLMK GRIR