Gene Rsph17029_3946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3946 
Symbol 
ID4898412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp1081212 
End bp1081982 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content69% 
IMG OID640114549 
ProductABC cobalt transporter, periplasmic binding protein CbiN 
Protein accessionYP_001045796 
Protein GI126464683 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG5266] ABC-type Co2+ transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTTT CTTCCCGGCC GCTTCTTGCG GCGCTCCTGC TGGCGGGCCT TGCCTCGCCT 
GCCATGGCAC ATTTTCAGGA GATCCTGCCG TCGGACGACG TGCTGCCCGA CGGGGGAGCC
GTGACGCTCG ATCTCCTCTT CACCCACCCG TTCGAAGGCG GCCCCGCGAT GGAGATGGCG
CGTCCCGCCG CCGTGGGCGT GCTGGCGCAC GGCACCCGCA CCGACCTGTC GGCCGCGCTG
GAGGAGACCG CGACCGGTGA GGCCCGAAGC TGGCGTCTCA GTCACACGCT TGACGAGCCG
GGCGCCGCCA TCTTCTACGT CACGCCCGAA CCCTATTGGG AGCCCGCGGA AGGCAAATTC
ATCGTCCATC ACGCGAAGGT GGTGGTCGAT GCCTATGCGA GCGGCGAGGG CTGGGACGAG
ATGGTGGGCC TGCCGGTGGA GATCCGCCCG CTGACGCGGC CGACCGGGCT CTGGACCGGC
AACCTCTTCA CCGGCGTGGT GACGAAGGCC GGCGCGCCGG TTCCTCACGC CGAGGTCGAG
GTGGAGTTCG TGAACACGGC CGGGATCCCC GCGCCGAACG ATGCCTACAT CACCCAGGTT
CTCCGGGCGG ATGCGAACGG CACCTTCTCC TATGCGATGC CGTTCGAAGG CTGGTGGGGC
TTTGCCGCGC TGATCGAGGC GGACGATCCG ATGGTCTCGC CCGAGGGTGC AGAAGTGCCG
GTCGAGGAGG GCGCGCTGAT CTGGGTGCGC ACCCGCAAGG CGGGCGAGTG A
 
Protein sequence
MLLSSRPLLA ALLLAGLASP AMAHFQEILP SDDVLPDGGA VTLDLLFTHP FEGGPAMEMA 
RPAAVGVLAH GTRTDLSAAL EETATGEARS WRLSHTLDEP GAAIFYVTPE PYWEPAEGKF
IVHHAKVVVD AYASGEGWDE MVGLPVEIRP LTRPTGLWTG NLFTGVVTKA GAPVPHAEVE
VEFVNTAGIP APNDAYITQV LRADANGTFS YAMPFEGWWG FAALIEADDP MVSPEGAEVP
VEEGALIWVR TRKAGE