Gene Rsph17029_3907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3907 
Symbol 
ID4899038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp1042722 
End bp1043420 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content66% 
IMG OID640114510 
Productfumarylacetoacetate (FAA) hydrolase 
Protein accessionYP_001045757 
Protein GI126464644 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCCT ACGTCCTACC CACCGCGGCG CAAGCCCACC TCGATGTCGT CGGCAGCGAC 
GAAAAATTCC CGGTGCGCCG GGTCTATTGC ATCGGCAAGA ACTACGTCGC CCACATCCGC
GAGATGAATG CGGACGAGCG CGACCCGCCG GTGATCTTCA TGAAGCCTGC GGATGCGGTG
GTGCGCAACG GCGGCGAGAT CCCCTATCCG GTCTTCACCG AGAACTTCCA TTACGAATGC
GAGCTCGTGG TGGTGCTGAA GTCGGGCGGC TACAACATCT CGGTCGCCGA TGCCGCCAGC
CACATCTACG GCTATGCCGT GGGCCTCGAC ATGACGCGGC GCGACCATCA GAAGGGCGTG
CTGGAAAAAG GCCTGCCGTG GGAGGTCACG AAGGCCTTCG ACCTCTCGGC CCCGATCGGC
CCCGTCACCC GCGCCGAGGA GTGCGGGGTG CTGACCTCGG GCCAGCTCAC GCTGAAGGTG
AACGGGGAGG TCAAGCAGGA TGCCGACATC GGGCTGATGA TCTGGAAGGT CGACGAGATC
ATTGCCAAGC TCTCCGAGCA GCACCGCCTT CAGCCGGGCG ACATCATCAT GACCGGCACG
CCCGCGGGCG TGGGCGCGGT GGTGACGGGC GACGTGCTCG ACTGCACCAT GGAGGGGCTC
GAGCCGATGC AGGTCCGCAT CGGGCCGAAG GCCGTCTGA
 
Protein sequence
MAAYVLPTAA QAHLDVVGSD EKFPVRRVYC IGKNYVAHIR EMNADERDPP VIFMKPADAV 
VRNGGEIPYP VFTENFHYEC ELVVVLKSGG YNISVADAAS HIYGYAVGLD MTRRDHQKGV
LEKGLPWEVT KAFDLSAPIG PVTRAEECGV LTSGQLTLKV NGEVKQDADI GLMIWKVDEI
IAKLSEQHRL QPGDIIMTGT PAGVGAVVTG DVLDCTMEGL EPMQVRIGPK AV