Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3889 |
Symbol | |
ID | 4898333 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | - |
Start bp | 1020468 |
End bp | 1021475 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640114493 |
Product | nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein |
Protein accession | YP_001045740 |
Protein GI | 126464627 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.475299 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.125658 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATCC ACAAGACACT GACGCCCTGG GCGGCGGCGC TTCTGCTCGC CTCGACGGCC TGGCCCGCGC TGGCCGAGGT TTCGACGGTG CGCCTCGCCA AGCAGTTCGG CATCGGCTAC CTGCCGCTCA CGCTGGTCGA GGAGCTGGAC CTGCTCGAGA AGCACGCGGC CGCCTCGGGC CACGAGATCA CGACCGAATG GCTGCGCTTC ACCGGCGGCT CGGGCATGAA CGAGGCGCTG CTGTCGGGCA ACCTCGATCT GGCGGCGGGC GGCACCGGGC CGCTCTTCAC CATCTGGGCC CGCACGCGCG AGAACCTGAA GATCAAGGGC GTGGCGGCGC TGGCCTCGAT GCCGCTGCAT CTGATGACCT CGAACCCCGA GGTGAAGACG CTGGCCGACT TCGGACAGGG CGACAAGATC GCCCTGCCCG CCGTCAAGAC CTCGATCCAG GCCGTCACGC TGCAGATGGC CTCCAAGCAG GCCTTCGGGG CGGACAAGGC CACCGCCATG GATGCCTTCA CCGTTTCGAT GGGCCATCCC GACGCGCAGC TCGCGCTGAC CGGCGGGCAG TCCGAAGTGA CGGCGCATTT CGGCTCGCCG CCGTTCCAGA ACCTCGAGGC CAAGGTCGAG GGCATCCACA AGGTGCTCGA CAGCTATGAC GTGCTCGGCG GCTCGCACAC CTTCACCGTG GTCTGGGCGG CCGACAAGTT CATCTCGGAG AACCCCGAGA TCACCAAGGC CTTCATGGCG GCGCTCGAGG AAAGCATGGA GCTGATCCGC ACCGACCCCG AGAAGGCGGC CGAGATCTGG ATGGCGGCCG AGCGCAGCCC TCTGAGCCGG GAAGAGGTCG TGGCGCTGAT CCAGGACGAG CAGACCGTCT GGACCACCAC GCCCGAGCGC ACCCTGCCCT ATGTCGAGTT CCTGAGCGAG TCCGGCCTCA TCAAGACCTC GGCCGAGGAC TGGAGCGAGA TCTTCTTCGA CACGATGTCG GGCAAGGAGG GAAGCTGA
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Protein sequence | MKIHKTLTPW AAALLLASTA WPALAEVSTV RLAKQFGIGY LPLTLVEELD LLEKHAAASG HEITTEWLRF TGGSGMNEAL LSGNLDLAAG GTGPLFTIWA RTRENLKIKG VAALASMPLH LMTSNPEVKT LADFGQGDKI ALPAVKTSIQ AVTLQMASKQ AFGADKATAM DAFTVSMGHP DAQLALTGGQ SEVTAHFGSP PFQNLEAKVE GIHKVLDSYD VLGGSHTFTV VWAADKFISE NPEITKAFMA ALEESMELIR TDPEKAAEIW MAAERSPLSR EEVVALIQDE QTVWTTTPER TLPYVEFLSE SGLIKTSAED WSEIFFDTMS GKEGS
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