Gene Rsph17029_3683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3683 
Symbol 
ID4898510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp788999 
End bp790003 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content70% 
IMG OID640114291 
Productglycosyl transferase family protein 
Protein accessionYP_001045545 
Protein GI126464432 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1442] Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0415394 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.880044 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCTGC TCTTCTGCGC CGACCGGCCG TTCTTCCGGC ATGCCGCGGT GGCGGCCGTG 
TCGGCCGCAA GCGCGACCCG AGGGCCCCTG CAGGTGCATC TTCTGACCTG CGACAGCTGT
CCCGAGGAGG AGGCGCGCTT CCGGGCCGCG CTTGCGCCCT TCGCCCATGT CGGGATCTCG
GTCCACCGGG TGCCGGCGAC CCGGCTCGAG GGGCTCTTCG TCGACCGGCA CCTGAGCGCT
GCGGCCTATC TGCGCTTCCT CGCCCCGGAG GTCCTGCCCG AGGCGGTGCA GCGCGTCCTC
TATCTCGATT GCGATCTGAT CGTGCTCGAC GATGTGGCCA AGATCCTGAG CATCGATCTC
CAAGGCAGGG CCGTGGCGGC GGCGCCCGAT CTCGGATGGA AGGATGCCGC GCAGGCGGCG
CGGTTCCGCA CCCTCGGCAT CCCGCTCGAC CGGCCTTATG TGAATTCCGG CGTTCTGCTG
ATGGACCTCG GCCGCTGGCG CCGGGACGGG CTGTCGCAGA AGCTGTTCGA CTATGTCGCG
CGCCACGGCT CGCTGCTGCT GCGCCACGAT CAGGACGCGC TCAACGCGGT GCTGGCCGAC
GATATCCATC TGCTCGACCG GCGGTGGAAC CTGCAGGTGC TGCTGCTGAG CCCCTGGGCG
AAGCGGGCCT TGCCGGAGGA TCGGCAGGCC ACGGTCGCGG CCCGGCGCGA TCCGGCGATC
CTGCATTTCT CGACGGCCGA GAAACCGTGG AACTTCCGCG TCTGGACGCG GCGGAGAGAG
CTTTATTTCC GGTTCCGTGC GCGCACGCCC TGGAGCCGCG CCGTGCCCGA GGGGCTGAGT
GCCGCGCAGG CCTGGGAATA TGATCTGGCG CGCAGGCTGC TGCGCCTCGG CCTCGACCTC
TATCTTCTGC GGGGCGCGGC CCTGCGCCTG CGCAGGATCC TTCTGGCACG CATGGAGCGC
GGGCGGACCT GGCCGGGCGC CGCACGGAGG CCGATGAACC GATGA
 
Protein sequence
MHLLFCADRP FFRHAAVAAV SAASATRGPL QVHLLTCDSC PEEEARFRAA LAPFAHVGIS 
VHRVPATRLE GLFVDRHLSA AAYLRFLAPE VLPEAVQRVL YLDCDLIVLD DVAKILSIDL
QGRAVAAAPD LGWKDAAQAA RFRTLGIPLD RPYVNSGVLL MDLGRWRRDG LSQKLFDYVA
RHGSLLLRHD QDALNAVLAD DIHLLDRRWN LQVLLLSPWA KRALPEDRQA TVAARRDPAI
LHFSTAEKPW NFRVWTRRRE LYFRFRARTP WSRAVPEGLS AAQAWEYDLA RRLLRLGLDL
YLLRGAALRL RRILLARMER GRTWPGAARR PMNR