| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3644 |
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| Symbol | |
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| ID | 4898756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009050 |
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| Strand | - |
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| Start bp | 742286 |
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| End bp | 744148 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640114252 |
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| Product | TRAP C4-dicarboxylate transport system permease DctM subunit |
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| Protein accession | YP_001045506 |
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| Protein GI | 126464393 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component
[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.173742 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACAG CAGAAGAATT CGACGTGGGA GACCTCAGCG AGAACGAGTC GGCGCGGCCG
GGCTCGCGCT TCATGCGGCC GGTCGAGGCG ATCGCGGCCC TGCTTCTGGT GGCGGTGATC
GGCCTGCTGC TGACCGGGGT CGTCTCGCGC TATCTCGTCA ACCTCCCCAT CATCTGGATC
GAGGAAGCGG CCTCGATCTG CTTCATCTGG CTCGCCATGC TGGGCGCGGC GATCTCGCTC
GACCGCAACG AGCATCTGCG GCTCACGCTC TTCGTCCGGA TGCTGCCGCG GCGCGCCGAG
GAATTCGTCG AGACCTTCGC CATGGTCATC GTCGGCACCT TCCTCGTGGC GCTGATGCGC
GACAGCTTCG AATATGCCTA CGAGGAATGG TTCATCACCA CCGCGGCGCT GCATATTCCG
AACACCTACC GCGTCGCCGC GATCCCCGTG GGCATGCTGG CCATGCTGGG GCTGCTCCTC
ATGCATCTCT TCCGCTCGAG CCGGCTCGTC GATGTGGCGA TTTCGGTGGG GGCGGTCGTG
CTGATCTCGC TCGGCCTCTG GGCCCTCTCG CCCCAGTTCA TCGCGATGGG CGCAACCGCG
CTGCCGCTCT TCCTCGTGGT GATCGTGGGC GCCTGCCTCT TTGCCGGCGT GCCCATCGCC
TTCTGCTTCG GGCTCGGCAC GCTGAGCTAT CTGCTCTTCG CCACCCACAT TCCGACCTAT
GTCATGGTCG GGCGCATGGA CGAGGGCATG TCGGGGGTGA TCCTCCTGTC GGTGCCGGTC
TTCGTGCTTC TGGGCTGCGT GCTCGATGCC ACCGGCATGG GCAAGGCCAT CGTGGGCTTC
CTCTCCTCGC TACTCGGCCA TGTGAAGGCG GGCCTGTCGC ATGTGCTCCT CGTGTCGCTC
TTCATCGTGT CGGGGATCTC GGGCTCGAAG GTCTCGGACA TGGCGGCCGT TGCGCCCGCG
CTCTTCCCCG AGATGAAGCG CCGCGGCAAC AAGCCGAACG AGATGGTGGC GCAGCTTGCC
ACCGGCGCCG CGATGGCCGA CACCGTGCCG CCCTCGATCG TGCTGATCGT GCTCGGATCG
GTCGCGGGCA TCTCGATCGC CGCGCTCTTC TCGGCGGGCT TCGTGGTGGC CATCGTGCTC
CTCTTGTCGC TGATGGCGCT GGCGCGCTGG CGGGCGCGGC ACGAGAACAT GGAGGGCGTG
CGCCGCGCCC GCTTCGGCGA CGTGATCCGC CTGCTGGTCT TCGCCGCCCC CGCGCTGGTG
CTGCCCTTCC TGATCCGTGC CGCCGTGGCC GAGGGCGCCG CCACCGCGAC CGAGGTCTCG
ACCATCGCCG TGGTCTATTC GCTGGTGATC GGCGGCCTGA TGTATGGCGG CTTCAGCCTC
CGCGCGCTCT ACCGGATGCT GGTCGAGACC GCGGCCATGA GCGGGGCGAT CCTCCTCATC
CTCGGCACCG CCCTCTCGAT GGCCTGGGCC ATCACCCAGG CGGGCGTGGG CCAGACGCTT
GCGGATTTCG CCATCAGCCT GCCGGGCGGG GCGCCCACCT TCCTCGTCCT CTCCATCGCG
ATCTTCCTCG TGCTGGGCTG CGTGCTCGAG GGGCTGCCCG CGCTCGTGCT GATGTCGCCG
CTCATGTTCC CCATCGCCCA CCAGATGGGG ATCAACGAGG TCCACTACGC CATGGTGATC
GTGGTCGCGA TGAACATCGG CCTCATGACC CCGCCCATCG GCATCGGCTT CTACCTCGCC
TGCCGCATCG GCAATGTCTC GCCCGACAGC GCGATCCACG CGGTCTGGCC CTATGTCGCG
GCCCTCATGG CCGGCCTGAT CGTCATTGCC GCGGTGCCGG CCATCTCCAC GGGCTTCCTC
TGA
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| Protein sequence | MTTAEEFDVG DLSENESARP GSRFMRPVEA IAALLLVAVI GLLLTGVVSR YLVNLPIIWI
EEAASICFIW LAMLGAAISL DRNEHLRLTL FVRMLPRRAE EFVETFAMVI VGTFLVALMR
DSFEYAYEEW FITTAALHIP NTYRVAAIPV GMLAMLGLLL MHLFRSSRLV DVAISVGAVV
LISLGLWALS PQFIAMGATA LPLFLVVIVG ACLFAGVPIA FCFGLGTLSY LLFATHIPTY
VMVGRMDEGM SGVILLSVPV FVLLGCVLDA TGMGKAIVGF LSSLLGHVKA GLSHVLLVSL
FIVSGISGSK VSDMAAVAPA LFPEMKRRGN KPNEMVAQLA TGAAMADTVP PSIVLIVLGS
VAGISIAALF SAGFVVAIVL LLSLMALARW RARHENMEGV RRARFGDVIR LLVFAAPALV
LPFLIRAAVA EGAATATEVS TIAVVYSLVI GGLMYGGFSL RALYRMLVET AAMSGAILLI
LGTALSMAWA ITQAGVGQTL ADFAISLPGG APTFLVLSIA IFLVLGCVLE GLPALVLMSP
LMFPIAHQMG INEVHYAMVI VVAMNIGLMT PPIGIGFYLA CRIGNVSPDS AIHAVWPYVA
ALMAGLIVIA AVPAISTGFL
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