Gene Rsph17029_3412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3412 
Symbol 
ID4898472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp479387 
End bp480466 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content68% 
IMG OID640114009 
ProductABC transporter related 
Protein accessionYP_001045277 
Protein GI126464164 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCA TCAGTCTGCA GAAGATCGTG AAGCGGTATG GCGGGATGGA GGCCATCCAC 
GGCGTCGATC TCGAAGTGGA GGACGGCGAA TTCGTAGCCT TCGTGGGGCC CTCGGGCTGC
GGGAAATCCA CGATGCTGCG GATGATTGCG GGGCTCGAGG ACATCAGCGG CGGCCATATG
CGCATCGGCG ACCGGCTGGT GAACGATATC GAGCCCAAGG GCCGCGACGT GGCGATGGTG
TTTCAGGATT ACGCGCTCTA CCCGCACATG ACGGTGCGCG ACAACATCGG CTTCGGGCTG
AAGATGCGCG GCGAGCCCGC CGAGACGATT CGGAAGAAGG TCGAGGAAGC CGCGCGCATC
CTCCAGCTCG AGGACCTGCT CGACCGCCGC CCCGGCCAGC TCTCGGGCGG CCAGCGCCAG
CGCGTGGCCA TGGGCCGCGC CATCGTGCGC AAGCCCAAGG TCTTCCTGTT CGACGAGCCG
CTCTCGAACC TCGACGCCAA GCTGCGGGTG GAAATGCGCA CCCAGATCAA GCGGCTGCAC
CGGATGCTGC GCACGACGAC GATCTATGTG ACCCACGATC AGGTCGAGGC GATGACGCTG
GCCGACCGCG TGGTCGTGCT GCGCAAGGGC AGCATCATCC AGCACGGCCG GCCGCTCGAG
CTCTACGAGC GGCCCTCCTG CCGCTTCGTG GCTGAGTTCA TCGGCTCGCC GCAGATGAAC
ATCCTGCCGG GCCGCGTGGC CTCGTCGGAT CGCGGCACGG TGATCGAGGT GGGCGGCGGC
GCGATCCCGC TTTCGCATCT GCCGGTGCCG GTGGGCACCA GCCTCGATGT GGGCCTGCGC
CCCGAGCATC TGGAGCCCTG CGCGCCCGAG GAGGCCGATT TCGTCGCAGA GGTGGACGTG
CTCGAGGAGC TGGGGTCGGA TACGCTCGCC ATCTGCCTCA TGGGCGAGCG CGAGATCACC
GTGCGGGTGC CGGCCGACCG GGCCCGCGGC CTCGGCCGCA CGCAGCCGCT GCGCTTCGAC
CGCCAGAACC TGCATCTCTT CGATGCTGCG AACGGCCAGC GGATCGACTT CATCGCCTGA
 
Protein sequence
MARISLQKIV KRYGGMEAIH GVDLEVEDGE FVAFVGPSGC GKSTMLRMIA GLEDISGGHM 
RIGDRLVNDI EPKGRDVAMV FQDYALYPHM TVRDNIGFGL KMRGEPAETI RKKVEEAARI
LQLEDLLDRR PGQLSGGQRQ RVAMGRAIVR KPKVFLFDEP LSNLDAKLRV EMRTQIKRLH
RMLRTTTIYV THDQVEAMTL ADRVVVLRKG SIIQHGRPLE LYERPSCRFV AEFIGSPQMN
ILPGRVASSD RGTVIEVGGG AIPLSHLPVP VGTSLDVGLR PEHLEPCAPE EADFVAEVDV
LEELGSDTLA ICLMGEREIT VRVPADRARG LGRTQPLRFD RQNLHLFDAA NGQRIDFIA