Gene Rsph17029_3285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3285 
Symbol 
ID4898849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp347514 
End bp348824 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content68% 
IMG OID640113883 
Product(dimethylallyl)adenosine tRNA methylthiotransferase 
Protein accessionYP_001045153 
Protein GI126464040 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0621] 2-methylthioadenine synthetase 
TIGRFAM ID[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[TIGR00089] RNA modification enzyme, MiaB family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAG CCCGCAAGCT CTTCATCAAG ACCTACGGCT GTCAGATGAA CGTCTATGAC 
AGCGAGCGCA TGGCCGAGGC GCTGGGCGCC AAGGGGTATG TGCTGACCGA GGTCGCCGAA
GAGGCCGACA TGGTGCTCCT GAACACCTGC CACATCCGCG AGAAGGCGGC GGAGAAGGTC
TATTCGGATC TGGGCCGCCT CCGGCCGCTG AAGACCGCCA AGCCCGACCT GAAGATCGGC
GTGGCGGGCT GCGTGGCACA GGCGGAGGGC GAGGAGATCC TCAAGCGGAT GCCGCTCGTG
GATCTGGTGG TGGGTCCGCA GAGCTATCAC CGCCTGCCCG ACATGCTGGA TCGCACCGAA
GGCGGCGCGC GCGTGGTGGA CACGGACTTT CCCGAAGAGG ACAAGTTCGA CCATCTGCCC
GAGCGCAAGG CCACCCGCGG CCCGGCGGCC TTCCTGACTG TGCAGGAGGG CTGCGACAAG
TTCTGCGCCT TCTGCGTCGT GCCCTACACC CGTGGCGCCG AGGTGAGCCG GCCCTTCGCG
CGGCTGATGG CCGAGGCCCG CGGGCTGGTC GAGCGGGGCG TCCGCGAGAT CACGCTTCTG
GGGCAGAACG TGAATGCCTG GTCGAGTGAC GGCCGCGGGC TCGGCGGCCT CATCCGCGAG
CTGGCCCGCA TCGACGGGCT CGAGCGGCTG CGCTACACGA CCTCGCATCC CAACGACATG
GCCGACGATC TGATCGAGGC CCACGGGGCC GAGCCCAAGC TCATGCCCTA TCTGCATCTG
CCGGTGCAGT CGGGGTCGGA CCGGATCCTG AAGGCCATGA ACCGCAAGCA CACGGCCGAG
CATTATCTGC GGCTGATCGA GCGGATCCGC GCCGCGCGCC CCGACATCCT GCTGACCTCG
GACTTCATCG TGGGCTTCCC CGGCGAGACC GAGGCCGATT TCGAGGCGAC GCTCGATCTG
ATCCGGGCGG TGGGCTTCGG CTCGGCTTTC TCGTTCAAAT ATTCCGCGCG CCCCGGCACG
CCCGCCGCCG AGAAGCCGGA ACTGCCGGGC GAGGTCTGCG ACGCGCGGCT TCAGCGGTTG
CAGGCGCTGG TGACCGAGCA GCAGCGGGCG GCACAGATGG CGATGGTCGG CCGCGAAGTG
GGCGTGCTCT ACGAGAAGGC CGGGCGCCTG CCCGGACAGA TGGTCGGCAA GTCCGACCAT
CTCCACGCCG TCCATGTCGA GGACAAGGCG GGGCGAGTGG GCGATCTGGT GCGCGTGCGC
ATCACCGCAA GCGCGCCCAA CTCCCTCGCC GGAGAGCGTC TGGGCGCCTG A
 
Protein sequence
MSEARKLFIK TYGCQMNVYD SERMAEALGA KGYVLTEVAE EADMVLLNTC HIREKAAEKV 
YSDLGRLRPL KTAKPDLKIG VAGCVAQAEG EEILKRMPLV DLVVGPQSYH RLPDMLDRTE
GGARVVDTDF PEEDKFDHLP ERKATRGPAA FLTVQEGCDK FCAFCVVPYT RGAEVSRPFA
RLMAEARGLV ERGVREITLL GQNVNAWSSD GRGLGGLIRE LARIDGLERL RYTTSHPNDM
ADDLIEAHGA EPKLMPYLHL PVQSGSDRIL KAMNRKHTAE HYLRLIERIR AARPDILLTS
DFIVGFPGET EADFEATLDL IRAVGFGSAF SFKYSARPGT PAAEKPELPG EVCDARLQRL
QALVTEQQRA AQMAMVGREV GVLYEKAGRL PGQMVGKSDH LHAVHVEDKA GRVGDLVRVR
ITASAPNSLA GERLGA