Gene Rsph17029_3270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3270 
Symbol 
ID4898725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp333049 
End bp334278 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content66% 
IMG OID640113868 
Producttryptophan synthase subunit beta 
Protein accessionYP_001045138 
Protein GI126464025 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0133] Tryptophan synthase beta chain 
TIGRFAM ID[TIGR00263] tryptophan synthase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.244666 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAGG ACGGCATCAA CAGCTACATG ACCGGCCCCG ACGAGCAGGG TCGTTTCGGC 
ATCTTCGGCG GACGCTTCGT GTCCGAGACG CTGATGCCGC TGATTCTCGA TCTCGAAGCG
CGCTATGAAC ATGCCAAGAC CGACCCGGAT TTCTGGGCCG AGATGGACGA CCTGTGGAAG
AACTACGTCG GTCGTCCCTC GCCGCTCTAT TTCGCGCCGC GGCTGACCGA GCATCTCGGC
GGGGCGAAGA TCTATCTCAA GCGCGACGAG CTGAACCATA CCGGCGCGCA CAAGATCAAC
AATGTGCTGG GCCAGATCAT CCTCGCCCGC CGCATGGGCA AGACCCGGAT CATCGCCGAG
ACGGGCGCGG GCCAGCATGG CGTGGCGACG GCGACGGTCT GCGCCAAGTT CGGGCTGAAA
TGCGTGGTCT ACATGGGCGC GCACGATGTC GAGCGGCAGG CGCCGAACGT GTTCCGCATG
CGGCTGCTGG GCGCCGAGGT GGTCCCGGTG ACCTCCGGGC GCGGCACGTT GAAGGATGCG
ATGAACGACG CCCTGCGCGA CTGGGTCACC AACGTGCGCG ACACCTTCTA CTGCATCGGC
ACCGTGGCGG GCCCGCATCC CTATCCGGCG ATGGTGCGCG ACTTCCAGTC GATCATCGGC
CGCGAAGTGC GCTGGCAACT GGCCGAGCAG GAGGAGGGCC GCCTGCCCGA CACGCTCGTG
GCCGCGATCG GCGGCGGGTC GAATGCCATG GGGCTGTTCC ATCCGTTCCT CGACGATCCG
TCGGTGCGGA TCGTCGGCGT CGAGGCCGGG GGCAAGGGCG TCGACGACCG GATGGAACAT
TGTGCCTCGC TGACCGGCGG ACGTCCGGGC GTGCTGCACG GCAACCGGAC CTATCTGCTG
CAGGATGCCG ACGGCCAGAT CCTCGAGGGC TTCTCGATCT CGGCCGGGCT CGATTATCCG
GGTATCGGGC CCGAACATGC GTGGCTCCAT GACACGGGCC GGGCGGAGTA TGTGTCGATC
ACCGATGCCG AAGCGCTGGA GGCGTTCCAG CTCTGCTGTG CGCTCGAAGG GATCATTCCC
GCGCTCGAGC CGTCGCACGC GCTGGCCCAT GTCATCAAGA TCGCGCCGAC GCTGCCGCGC
GACCATATCA TCGTGATGAA CATGTGCGGG CGGGGCGACA AGGACATCTT CACCGTGGCG
AAGCATCTGG GCTTCGACAT GAAGATCTGA
 
Protein sequence
MAEDGINSYM TGPDEQGRFG IFGGRFVSET LMPLILDLEA RYEHAKTDPD FWAEMDDLWK 
NYVGRPSPLY FAPRLTEHLG GAKIYLKRDE LNHTGAHKIN NVLGQIILAR RMGKTRIIAE
TGAGQHGVAT ATVCAKFGLK CVVYMGAHDV ERQAPNVFRM RLLGAEVVPV TSGRGTLKDA
MNDALRDWVT NVRDTFYCIG TVAGPHPYPA MVRDFQSIIG REVRWQLAEQ EEGRLPDTLV
AAIGGGSNAM GLFHPFLDDP SVRIVGVEAG GKGVDDRMEH CASLTGGRPG VLHGNRTYLL
QDADGQILEG FSISAGLDYP GIGPEHAWLH DTGRAEYVSI TDAEALEAFQ LCCALEGIIP
ALEPSHALAH VIKIAPTLPR DHIIVMNMCG RGDKDIFTVA KHLGFDMKI