Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3186 |
Symbol | |
ID | 4898174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | + |
Start bp | 223159 |
End bp | 224205 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640113787 |
Product | integrase catalytic subunit |
Protein accession | YP_001045057 |
Protein GI | 126463944 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCAGT CGACGAAGGC TCCGAAGGTG CGGAAGCGCG ACCCGGACAC GAAGCTGGCT CAGCACCGCC TGAGCGTGCT GGAGTTGGCG AAGGAACTCG GCAACGTCGC CGAGGCCTGT CGGCAGCGGG GGTTGGACCG GACCAGCTTC TACGAGTGGA AGCGGCGGTT TCAGACTCAA GGCTTCGAGG GGCTCAAGGA CCTGCCGCCG ATCCACAAGA GCCACCCGCA GTCGACGCCC CCGGAGACGG TGGCGCGGAT CAAGACTCTG GCGCTCGCCC ATCCGGCCTA TGGCTGCAAC CGGTTCGAAG CGATGCTGGC GCTGGAGGGC ATCCGGGTCT CGTCGATCAC CATCCAGAAG ATCCTGAACG AGAACGGTCT GGGCACGAAG TCCGACCGCT GGCTGGCGCT GGAGCAGGCC AACGCTGAAA AGAGGATCGA GTTGACCGCG GAGCAGGCCG CCTTCATCGA GAAGCTGAAC CCGTGCTTTC GGGAAAGGCA TGTGGAATCA AGCGCCCCCG GCGAACTCCT CTCCGCCGAT ACCTTCTTCG TCGGCGCGCT CAAGGGGATC GGTCGGGTCT ACCTGCACGC TGTCGTCGAC ACCTTCGGCT CCTACGCCTT CGGGTTCCTG CACGTCTCCA AGCAACCCGA GGCGGCGGTG GCGGTGCTGC ACAACGACGT GCTGCCGTTC TACCGCAACC TGGATCTGCC CGTCGGCGCG GTGCTGACCG ACAACGGCCG CGAGTTCTGC GGGACGGAGC GGCATCCTTA CGAGCTCTAT CTCGACCTCA ACGGCATCGA GCACCGCCGA ACCCGCGTCC GGACGCCCAA GACGAACGGC TTCGTCGAGC GCTTCAACGG CACCATCCTG GACGAGTTCT TCCGGGTCGC GATGCGCGAC AATTTCTACG AAAGCGTAGA GGCCCTGCAG GCCGATCTCG ACGCCTGGCT CGTCCACTAC AATACCGAAC GGCCACATCT CGGCTACCGA AACATGGGCC GTCGACCGGT CGAGACCGTC ATGTCATTCG TCAGTCAAGA AGGTTAA
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Protein sequence | MDQSTKAPKV RKRDPDTKLA QHRLSVLELA KELGNVAEAC RQRGLDRTSF YEWKRRFQTQ GFEGLKDLPP IHKSHPQSTP PETVARIKTL ALAHPAYGCN RFEAMLALEG IRVSSITIQK ILNENGLGTK SDRWLALEQA NAEKRIELTA EQAAFIEKLN PCFRERHVES SAPGELLSAD TFFVGALKGI GRVYLHAVVD TFGSYAFGFL HVSKQPEAAV AVLHNDVLPF YRNLDLPVGA VLTDNGREFC GTERHPYELY LDLNGIEHRR TRVRTPKTNG FVERFNGTIL DEFFRVAMRD NFYESVEALQ ADLDAWLVHY NTERPHLGYR NMGRRPVETV MSFVSQEG
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