| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3171 |
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| Symbol | |
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| ID | 4898883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009050 |
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| Strand | + |
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| Start bp | 197782 |
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| End bp | 198816 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640113773 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_001045043 |
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| Protein GI | 126463930 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.583419 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACGA TCTTCTCCGA CAAGCACGCG CTGCAGACCG TGGAGCGCGA ATTCTACCGG
GGCGGCTGGG TGGAGGCGTT CGAGATCCCC CGCCGCGCCG AACTCGTGCT GGCCGCCGTC
ACGCGCGCGG GCTTGGGCCC CGTGACAGCG CCGCAGCCGT TCGACCTCGG GCCCGTGCTG
GCCGTCCATG ACCCGGCCTT CGTGCGCTTT CTGGAGGGCG CCTGGGAGAG CTGGGTGGCC
GAGATGGGCC CGGTTCCGGC CTATCCCAAC CTCTGGCCGC CGCGCCGGTC GCGGACGATC
CCGACGGTCC GGCCCGGCGC CGAACTCGGC CGCTATGTCG TCGACATGAG CAGCCCGATC
CTTGCGGGCA CATGGGAGGC CGCGCGGGCG GGCGTCGACT GTGCCCTGAC CGGCGTGGCC
CTGATCGAAT CGGGCGAGCC CGCGGCCTTC GCCCTCAGCC GTCCCCCGGG CCACCATGCG
GGGCGCGACT ATTTCGGCGG TTACTGCTTC CTCAACAACG CGGCGATCGC CGCGCAGCAG
TTCCGCAGCC TCGGCGCGGA GCGGGTGGCG GTGCTCGACA TCGACTATCA CCACGGCAAC
GGCACGCAGG ACATCTTCTA CGACCGCGGC GACGTGCTGA CCGTCTCGGT TCATGCCGAT
CCGGTGCAGG ACTATCCCTA TTATATCGGC TTCGCCGACG AGACCGGCGA GGGGGAGGGA
GAGGGTGCGA ACCTGAACCT GCCGCTGCCC TGGGGCGAGG ATTTCGCGGC CTACCGCAGC
GCGCTTTCCG AAGGCCTGGC GCGGATCCGG GCCTTCGCCC CCGACCGGCT GGTGGTGTCG
CTGGGCGTCG ACACGTTCAT GGACGATCCG ATCTCGCAGT TCCGGCTGGA GAGCGGGGAT
TACCCCCGGA TCGGCGCGAT GATCGCCGCC CTCAGCCTGC CCACACTCTT CGTGATGGAG
GGCGGCTATG CCATCGAGGC CATCGGCGAG AATGTCGTGC AGCTTCTGAA GGGATACGAG
GCGGAGCGCG GCTGA
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| Protein sequence | MKTIFSDKHA LQTVEREFYR GGWVEAFEIP RRAELVLAAV TRAGLGPVTA PQPFDLGPVL
AVHDPAFVRF LEGAWESWVA EMGPVPAYPN LWPPRRSRTI PTVRPGAELG RYVVDMSSPI
LAGTWEAARA GVDCALTGVA LIESGEPAAF ALSRPPGHHA GRDYFGGYCF LNNAAIAAQQ
FRSLGAERVA VLDIDYHHGN GTQDIFYDRG DVLTVSVHAD PVQDYPYYIG FADETGEGEG
EGANLNLPLP WGEDFAAYRS ALSEGLARIR AFAPDRLVVS LGVDTFMDDP ISQFRLESGD
YPRIGAMIAA LSLPTLFVME GGYAIEAIGE NVVQLLKGYE AERG
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