| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3169 |
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| Symbol | |
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| ID | 4898881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009050 |
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| Strand | - |
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| Start bp | 194533 |
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| End bp | 196140 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640113771 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001045041 |
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| Protein GI | 126463928 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.116403 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAT CGCACCACCT GCTGATGGAC GATCTGGTCA CGCGGCTGCG GCGCGGACAG
CTGTCGCGTC GCGAGTTTCT GGCCCGCAGT TCGGCGCTGC TGGCGGCCGG GGCCATGAGC
GGGCTGCCCG GTGCGGCGCT TGCCCAGCAG GCGGCGCCGA AGGCCGGCGG CTTCATGCGG
CTCGGCCTGC ACAATGCCTC GCAGAACGAC AACCTCGATC CCGGCAGCTG GTCGACGAGC
TGGACCGGCG CCTCGTTCAA CGGCGGCGTC TACAACAACC TGGTCGAGAT CATGCCCGAC
GGCTCCGTCG CGGGCGATCT GGCCGAGAGC TGGGAGGCGG AGCCCGGCGC GAAGGTCTGG
CGCTTCAAGC TGCGCTCGGG CGTGACCTTC CACAACGGCA AGAGCCTCGA GGCGGAAGAC
GTGCGCCAGT CGCTCGAGCA TCACATGAAG CCGGACTCGA CCTCGGGCGC GCGCGCCATC
GTCGAGCAGA TCGAGACCAT CGACATCGAA GGGTCCGACA CCGTCCGCAT CACCCTGTCC
GAGGGCAATG CCGACCTGCC CTACCTCTTG TCGGATTATC ACCTCTCGAT CTATCCGGCG
CTGGAGGGCG GCGGGATCGA CATGGAGAGC GCCAACGGCA CCGGCGCCTT CCTCCTCGAG
AGCTTCGAGC CGGGCATCGC CACCCGCCTC AAGCGGAACC CGAACTATCA CAAGAACAAC
AAGCCCTATC TCGACGAGGT CGAGTTCATC AACATCACCG ACGCCACGGC GCGGCTGAAC
GCGCTGCTGA CCGGCGAGGT CGATTTCATC CAGGATCTCG ACATCCGCAA CGTGGCGATG
GTCGAGCGCA GCGGCGATTT CTCGGTTCAG CGTGTGCCGA GCCTGCGCCA CTTCACCTTC
GACATGGACA CCCGCGTGGC GCCCTTCGAC AATCCCGACG TGCGGCTGGC GCTGAAATAT
GCGCTCGACC GGGACGACGT GATCGAGAAG GTGTTCCTCG GCGAGGCCAC GAAGGGGAAC
GACAACCCGG TCGCCTCGAT CCAGAAGTTC TACCACGACA TGCCCGCGCG CGAATACAGC
ATCGCGAAGG CCAAGGAGCA TCTGGCCAAG GCCGGGCTCG ATCAGGTGAC TGTCGATCTC
TCGGTGGCCG AGAATGCCTT CGCGGGCGCC ATCGAGGCGG CGACCCTCTA CCAGCGCCAT
GCGGCCGAGG CCGGCATCAA CATCAACATC GTGCAGGAGG CGGCCGACGG CTACTGGGAG
AACGTCTGGC GCAAGAAGCC CTTCTGCGCG GTGGACTATT TCGGCCGCGC CACCGTCGAC
TGGCTGTTCT CGACGAGCTA TGTCACCGGC GCGCCGTGGA ATTCGGGCTG GTCGAACGCG
CGGTTCGACG AGCTGCACCA GACGGCACGG GCCGAGACCG ACGAGGCCAA GCGCGCCGCC
TGCTACGCCG AGATGCAGGA GATCCTGCGC GACGACGGCA ACGTCATCAC CGTGGCCTTC
GTGAGCTGGC GCAACGCCGT CTCGAACCGC ATCGGCTTCG GCGAGGTCGG CGGGCTGATG
CCGCTCGACA ACATGCGGAT GTGCGAGCGC TGGTGGGTCA AGGACTGA
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| Protein sequence | MNKSHHLLMD DLVTRLRRGQ LSRREFLARS SALLAAGAMS GLPGAALAQQ AAPKAGGFMR
LGLHNASQND NLDPGSWSTS WTGASFNGGV YNNLVEIMPD GSVAGDLAES WEAEPGAKVW
RFKLRSGVTF HNGKSLEAED VRQSLEHHMK PDSTSGARAI VEQIETIDIE GSDTVRITLS
EGNADLPYLL SDYHLSIYPA LEGGGIDMES ANGTGAFLLE SFEPGIATRL KRNPNYHKNN
KPYLDEVEFI NITDATARLN ALLTGEVDFI QDLDIRNVAM VERSGDFSVQ RVPSLRHFTF
DMDTRVAPFD NPDVRLALKY ALDRDDVIEK VFLGEATKGN DNPVASIQKF YHDMPAREYS
IAKAKEHLAK AGLDQVTVDL SVAENAFAGA IEAATLYQRH AAEAGININI VQEAADGYWE
NVWRKKPFCA VDYFGRATVD WLFSTSYVTG APWNSGWSNA RFDELHQTAR AETDEAKRAA
CYAEMQEILR DDGNVITVAF VSWRNAVSNR IGFGEVGGLM PLDNMRMCER WWVKD
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