| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3131 |
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| Symbol | |
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| ID | 4899189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009050 |
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| Strand | + |
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| Start bp | 147812 |
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| End bp | 151333 |
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| Gene Length | 3522 bp |
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| Protein Length | 1173 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640113733 |
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| Product | ImcF domain-containing protein |
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| Protein accession | YP_001045003 |
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| Protein GI | 126463890 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3523] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03348] type VI secretion protein IcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00864499 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.238793 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCGC TCCGCAGCCT CCTCGCCGCC CTGACCTCGC GGACGCTCTG GACCTTCCTC
GGGCTCGCGC TCCTCTGCGG GCTGATCTGG CAGTTCGGCG CGCTGGTCTC GGTGGGCGAG
ACGGTGCCGC TCGCCTCCGA CCTCGCGCGG GGGCTGGTCG TGGGCTGCAT CGTGGTGGGC
TGGCTTCTGT CGCTGCTGGC AGCCCAGCTG CGGGCGGCGC GCAGGAACCA GCTCTTCGTG
ACCGAGCTTG CGGCGCCCGC TCCCGCCGCC CCCGATCCCG GCGCGGCGGC CGTGGCCGAG
GTCGGGGCGC GGTTCCGGCA GGTGATGGCC GAGATGAAAC GCTCGCGCGT GGGCGGGCGG
CGCTTTCTGC GCGACATGCC GTGGTATCTG CTGATCGGCC CGCCCGGCAC CGGCAAGACC
ACGGCCCTGC GCCAGTCGGG GCTGCATTTC CCGATCGATC CCGGCGACGA CCTGCAAGGC
GTGGGCGGCA CGCGGAACTG CGACTGGTTC TTCACCGAAG GGGCCGTGCT GGTGGACACG
GCCGGGCGCT ACGTCCAGCA GCAGAGCGAT CCCGAGGCCG ATGCCGCGGA ATGGTCGGGT
TTTCTGGACC TTCTGAAGCG CCACCGCGGG CGGCGGGCGC TGAATGGCGT GATCGTGGCC
CTGTCGATGA CCGAGATTCT CGGGCCCGAG CCCGCGCTGC GCGCTCATGG CCGCGAGATC
CGCAAGCGGC TGAGCGAGCT CGGCCAGAGG CTCCAGATCC GCCTGCCGGT CTATCTGATG
GTGACGAAGG CCGACCTCGT GCCGGGCTTC GAGACCTTCT TCGCGCCCCT GCCCGCGCGC
GGGCGCGAGC AGGTCTGGGG GGCGACGCTT GCACCCGACG AACGTCCCGA GGGCGGGGCG
GTCGACCGCG AGGCGCGGGC GCTCTGGCAG GAACTCGAGG CCCGCGTCGG GCCGCGGCTG
GCCGAGGAGG CCACGCTGGC CGACCGGGCC GAGATCTTCC GCTTCCCCGC GCGGATGGCC
GAGGTCGAGG CGCCGCTGCG GGTGCTGATC GCCACCCTCT TCGGCGAGAG CCGCTACGAG
GACAGCCCCT GGCTCCGCGG TTTCTACTTC ACCTCGGCCA CGCAGGAGGG CTCGCCGATC
GACCGGATGC TCGGGGATCT GGCGGGCGCC TTCGGCCTCA GCCCGCCCGC GCCTCCCCGC
CGGGCGCGGA GCGAGACACG CTCCTATTTC CTGCACGACC TGCTGGCGAA GGTGATCTTC
CCGGAAGCCG GGCTCGGTCG CCTCGACCGG GCGGCGGAGG AGCGGCGGCG CTGGCTCTGG
CGCGGATCGG TGGCGGGCGC GGCGCTTGCC ACGGCGGTGG CGGGGGTGGG CTTCCTCCTC
TCGTTCCTCG GCTGGTCGGG CGCCATCGAG GATCAGGCGC GGCTGACCGC GGATCTCTCC
GCCCGGCTGG CCAATGTGGC CGCGCGGCAG GCACCGACCG AGCCGCTGGA CCTGCCCCTC
GCGCTGGAAG CCGCGACTGC CGCGGACGCC GCACGCACGG AGCCGCCCTC GGGGCCCCTC
GCCTTCATCG GCCCCTCGGC CGCGGCCGAG ATCGAGCGGG CGGGCACCAT CGCCTACGAG
CGCACGCTGG CCAATGTGCT TGCGCTGCGG ATGGTGGCGC TGCTCGAGGC CTCGATGTGG
CGGCAGGTGC GCGATCCCGA CGACATGCTG GGCGCGCTCA AGGCCTATTT CATGCTGACA
GGCCTCGCGC CCTACGACCG CGACTTCCTG ACCGGCTGGT GGCAGGAAGA GCTGCCGCAG
CAGGCGGTGC TCGACCCGTT CCCGACCGAG GCGGCCCGCA GGCACCAGCT GGCCGCGCTT
TCCCTTTTCG GCACGCAGGG CGACCCTGTC CCGGCCGACG AAGAGCTGGT GGCGGCGGCG
CTGGCCAGCA TCTGCACCAT CCCCCTCGCG GCCCGCGCCT ATGGCGCGCT GATGCAGGAT
CCCGCGGTCA CGGGCCTGCC CGACTGGATC CCCGGAGACG AAGCTGGGCC GAACGGCGCG
AGGATCTTCA CCCGCCTCTC TGGCAAGACG CTGCGGGTGG GGCTGCCCGG CGCCTTCACT
TTTGCGGGCT TTCACGAGAC GATCCTGCCG CTCGTGCCGG AAGTCGCCGC GCAGGCCACG
CTCGACCGGA CCCTCTTTGC GGGCGGCTGC GGCGGCAGCG CCGGGGCCTC GGCCGCCACG
CTCGAGGCGG ACATCCTGAA GCTCTATTCC GACGATTTCA TCGCGCGCTG GGATGGGCTT
CTGCGCGACA TCCGGCTGGC GCCGCTGACG GACTTCGCCA CCGCCACTGC GGCGATGAAG
GATCTGGCGA GCCCCGACAG CGCGCTGAAG CGGCTGCTCG CTGCGGTCGT GGCCGAGACC
GACCTCACGC GCGTCCCCGT CCCCGATGCG GCGCCGCCCG AGGGTCTCCT CAAGGCCGCC
AGCAAGAAGC TTGGGAAGGT GGGCAAGCTC GTGAAGGGGG CCGCGGCGCT GTCGGCGGGC
TCCGCTCCGC CCACGGAGCC GCCGGGGCAG GCGGTGGCGC GCCATTTCGA GCCGCTGAAG
GGGATGATCG CCGAGGTGGA GGGGGTGCCG CCGCGGATCG GGGATGCCGA ACTCGCGCTC
GGCGCGCTGG CCAATGCGCT TCAGACCGCG GCGGCCAATC CCGATCCGCA GGCGGCGCTG
ACCGCGCAGG GGGGGCTTGC CACGCTGACG GGCGGGCTGA CCGAGGTCGC CGCCCGCCTG
CCGCCCCCCA TCGGCGCCTG GCTCGAGGGG CTGGCCACGG ACACGGCCAG CGTGACGCGC
GAGGCGGCGA TCGCCCGGCT GAACGCGCGC TACCGGGCCG ACATCCTGCC CTTCTGCCGC
GCCGCCACCG CGGGCCGCTA TCCGTTCGAG CCGGGCTCGG CCATCGATGT GAACACAGCC
GATTTCCAGC GCCTCTTCGG ACCCGGCGGC CTGTTCGACG GCTTCACGGG CGACGCGCTC
GGGCCCTGGA TCGACACGAC GCGGCACCCC TGGGCGTGGC GCGCCGATCT GGGGCTCGCT
GCCCGGAGCC TCGCGCCCTT CGAGGCCGCC CGGCGGATGC GCGACGGTCT CTTCGCCGGA
GGCATCGGCC CGGTGATGGG CTTCCTGCTT CAGGCGACGG ACCTGTCGCC CAATGCCGCC
CGGGTGACGC TGAGCCTCGA CGGCCAGCAG CTTGTCTACA TGAATGCGGC GACGCCCCCC
GTGGGCATGA CCTGGCCCGG CCAGAACGGA ACGAACCTCA TCGTGCTCTC CTTCACGCCG
CTCGACGGGT CGGCCGAGGC GGTGACCTCG GAATCCGGCG CCTGGGCCTG GCTCCGGCTG
ATCGGCAAGG GCAGCCTCTC GCCCACCGCG CAGCCCGACC TGTTCCGGCT GCGCCTCGCC
GCCGGAGCCT ATGGCGCGCG CTTCGATCTC CGGGCGAATT CGGTGGAGAA CCCGCTCGAC
CTCAGGCTCT TCGGCGGGTT CCGCTGCCCG GATGGCTTCT GA
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| Protein sequence | MRALRSLLAA LTSRTLWTFL GLALLCGLIW QFGALVSVGE TVPLASDLAR GLVVGCIVVG
WLLSLLAAQL RAARRNQLFV TELAAPAPAA PDPGAAAVAE VGARFRQVMA EMKRSRVGGR
RFLRDMPWYL LIGPPGTGKT TALRQSGLHF PIDPGDDLQG VGGTRNCDWF FTEGAVLVDT
AGRYVQQQSD PEADAAEWSG FLDLLKRHRG RRALNGVIVA LSMTEILGPE PALRAHGREI
RKRLSELGQR LQIRLPVYLM VTKADLVPGF ETFFAPLPAR GREQVWGATL APDERPEGGA
VDREARALWQ ELEARVGPRL AEEATLADRA EIFRFPARMA EVEAPLRVLI ATLFGESRYE
DSPWLRGFYF TSATQEGSPI DRMLGDLAGA FGLSPPAPPR RARSETRSYF LHDLLAKVIF
PEAGLGRLDR AAEERRRWLW RGSVAGAALA TAVAGVGFLL SFLGWSGAIE DQARLTADLS
ARLANVAARQ APTEPLDLPL ALEAATAADA ARTEPPSGPL AFIGPSAAAE IERAGTIAYE
RTLANVLALR MVALLEASMW RQVRDPDDML GALKAYFMLT GLAPYDRDFL TGWWQEELPQ
QAVLDPFPTE AARRHQLAAL SLFGTQGDPV PADEELVAAA LASICTIPLA ARAYGALMQD
PAVTGLPDWI PGDEAGPNGA RIFTRLSGKT LRVGLPGAFT FAGFHETILP LVPEVAAQAT
LDRTLFAGGC GGSAGASAAT LEADILKLYS DDFIARWDGL LRDIRLAPLT DFATATAAMK
DLASPDSALK RLLAAVVAET DLTRVPVPDA APPEGLLKAA SKKLGKVGKL VKGAAALSAG
SAPPTEPPGQ AVARHFEPLK GMIAEVEGVP PRIGDAELAL GALANALQTA AANPDPQAAL
TAQGGLATLT GGLTEVAARL PPPIGAWLEG LATDTASVTR EAAIARLNAR YRADILPFCR
AATAGRYPFE PGSAIDVNTA DFQRLFGPGG LFDGFTGDAL GPWIDTTRHP WAWRADLGLA
ARSLAPFEAA RRMRDGLFAG GIGPVMGFLL QATDLSPNAA RVTLSLDGQQ LVYMNAATPP
VGMTWPGQNG TNLIVLSFTP LDGSAEAVTS ESGAWAWLRL IGKGSLSPTA QPDLFRLRLA
AGAYGARFDL RANSVENPLD LRLFGGFRCP DGF
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