Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3129 |
Symbol | |
ID | 4899187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | + |
Start bp | 145058 |
End bp | 146386 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640113731 |
Product | hypothetical protein |
Protein accession | YP_001045001 |
Protein GI | 126463888 |
COG category | [S] Function unknown |
COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000877531 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.24855 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGCA ACAGGGTGGT CTGGTCGGAA GGGCTCTTCC TCAGGACCCA GCACTTCCAG CAGCAGGACC GGCACGCCGA GGCGCTGTTG CGCGCGGCGC TTCTTGCGGC GCCCTGGCAG CCCTTCGGCT TCACGAGGCT CGCGCTCGAT GCGGCGGCGC TCGACGCAGG CCGCGTGGCG CTCGCCGAGG CGGAGGCGCT GATGCCGGAC GGCACGGCCT TCCGCCTGGC CGAGGCCGAG CCGCCGCCGG CCGCGGCGCT CCGCCGCGAC GGGCCGCCGG GCCTCGTCCA GCTGGCGCTG CCGCTCGAAC AGGAGGGGGC GGCGAGTGTC GATCCCGCCC ATGCCGCACC TTCGGGGGCG CGCTACCGCG GGCGGATCGA GGTGCTGCGC GATGCGATCC GCGGCGGCGC CGAGCCCGAG GAGGTGGAGC TCGCGCGGCT CGCCCCGCGC CTGATCGCGC CGGGAGAGCC CGCGGACGGC TGCGTGACGC TGCCCGTGGC GCGCGTCGAG GGGCTGCGCG CGGACGGATC GGTGGCCCTG CAGGAGGGAT GGCTGCCCCC TGCCCTCACC ATCGGCGCCG TGCCGTGGTA TGGCGCGCTG CTTCAGGAGC TGGTGACGGG GCTCGACCGG GTGGCCGATG CCCATGGCGG GCTCGTGCTG GGCGGCGCCG GGCGCTCGAT CGAGAACCTG CTGATCCTCG AACTGGCCAA CACCGCGCGC CCGCGCCTCG CCCACCTGCT CCAGCAGGCG CAGGAACATC CCTCGGCGCT CTATGCCGAG CTGGCCGCGC TCGCCGGGCG GATGGCGACC TACGGCTCCT CCTCGCGCCG GCTGAGCGCG CTTGCGCCCT ACGACCATCT CGAGCCGCAA CCGGCCTTCG CGGCTCTGGC CGACACGCTG CGTTCGCTTC TTCTGTCGCT GCGCCATGTC GAGCCGAAGT CGCGCGCGCT GCCGGTGGCG CGCCATGCGC AGAACATCTG GAAGGTCCGC ATCGACAATC CCGAGATCCT GCGCTCCTCG CGCATCGTGC TGCGCGTGGG CTCGGAGATG TCGGACGAGA GCCTGCGCCG GCTCTTCGCC GATCAGGCGA CGGTGGGCGC GGCCGATGCC TTCGAGCGGC TCTGGACCTC GCGCCTGCCG GGCATCCCGC TGAAGCCGCT CCATTCCCAG CCGCGCGAGA TCCCCTACGA CGGCGAGCGG CTCTGCCTCG AGCTCGATCA GAAATCCGAG CACTGGTCGC AGTTGCTCGA GGCGCCGGGC TTCGTGGTGG GGGTTTCGGG CGTGCTCGAG CGCGAGCCGC AGATCGATTG CTATGCGGTG AGCCGATGA
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Protein sequence | MSGNRVVWSE GLFLRTQHFQ QQDRHAEALL RAALLAAPWQ PFGFTRLALD AAALDAGRVA LAEAEALMPD GTAFRLAEAE PPPAAALRRD GPPGLVQLAL PLEQEGAASV DPAHAAPSGA RYRGRIEVLR DAIRGGAEPE EVELARLAPR LIAPGEPADG CVTLPVARVE GLRADGSVAL QEGWLPPALT IGAVPWYGAL LQELVTGLDR VADAHGGLVL GGAGRSIENL LILELANTAR PRLAHLLQQA QEHPSALYAE LAALAGRMAT YGSSSRRLSA LAPYDHLEPQ PAFAALADTL RSLLLSLRHV EPKSRALPVA RHAQNIWKVR IDNPEILRSS RIVLRVGSEM SDESLRRLFA DQATVGAADA FERLWTSRLP GIPLKPLHSQ PREIPYDGER LCLELDQKSE HWSQLLEAPG FVVGVSGVLE REPQIDCYAV SR
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