Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3118 |
Symbol | |
ID | 4898919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | - |
Start bp | 131247 |
End bp | 133916 |
Gene Length | 2670 bp |
Protein Length | 889 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640113720 |
Product | ATPase |
Protein accession | YP_001044990 |
Protein GI | 126463877 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0362166 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCGGG GCTCGCAGGA AACCGTCAAG CGGAAGGAAC TGGTGGCGAA GCTGAACCCG ACCTGTCTCG CGGCCTTCTC GGCGGCGGCT CAGGCGGCGA AGGCGCGCGG CAACCCCTAT GTGGAGCTGG TCCATCTGAT CGAGGCGCTG CTCGCCGCGG ATCGGTCCGA CATGGCGCTG CTGATGCGCG CGGCAGGCTG CGATGCCGGC CGGCTCTCGG CCGATGTGGC CCGCGCGGTG GACGTGCTGC CACGCGGGGC GAGCGCGGTG GAAGAATTTT CCGACCATCT CTTCCATGCC ATCCGCGAGG GCTGGACCTT CGGCAGCCTG CGGTTCGGCG ACGACCGCGT GCGCTCGGGA TACCTCCTGC TTGGCGCGCT GCGGGTGCCC GTGCTCGAGG CGCTGCTCAT GCGGATCAGC GGCGCCTTCG GGCAGGTGGA TGCAGAGTCT CTTTCCGAGA CGTTCCGCGA TCTGACGCAG GGCTCGGCCG AGGGCGATGC CGCGCCGCCC CCCGCGCGGC CGGGCGCGGC CGACGGCTCC GCGCTCGCCC GCTATGCGAC CGATCTGACG GCGCGGGCGC GGGAGGGGCG GCTCGATCCG GTCGTGGGGC GCGATCCCGA GATCCGGCAG ATCATCGACA TCCTGATGCG GCGGAGGCAG AACAATCCGA TCCTCACCGG CGAGGCCGGG GTGGGCAAGA CCGCCGTCGT CGAGGGCCTT GCGCTGCGGC TTGCCCGCGG GGACGTGCCG CCGCCGCTGC GTACGGTGAC CCTGTGGATG CTCGATCTCG GGCTGATGCA GGCGGGTGCC AGCATGAAGG GCGAGTTCGA GAAGCGGCTG AAGAGCGTGA TCGACGAGAT TCAGGCCTCG GACGCTCCGG TGATCCTCTT CATCGACGAG GCCCATACGC TGATCGGCGC GGGCGGCGCG GCGGGGACGG GGGACGCGGC CAATCTTCTC AAACCGGCAC TGGCACGGGG AGAGCTGCGC ACCGTCGCCG CCACCACCTG GGCCGAATAC AAGCAGCATA TCGAGCCCGA CCCGGCGCTG ACCCGCCGCT TTCAGGTGGT GCGGATCGAG GAGCCCTCGG AAGAGGCCGC GATCCGCATG TGCCGCGGCG TGGCCGCCGT GCTGGAGCGC CATCACCGGG TCGAGATCCT CGACGAGGCG GTGGGGGCGG CGGTGCGGCT GTCGCATCGC TACCTGCCGG CCAGGCAATT GCCGGACAAG GCGATTTCCC TGCTCGACAC CGCCTGCGCA CGCGTCGCCG TCTCGCAGCA TGCGACGCCG GCGGAGGTCG AGGACATCGA CCGCCGCGCG CAGGCGCTCG AGATCGAGGC GGGCATCCTC GAGCGCGAGG AGGCCGTGGG CATGGATGTG ACGGCGCGCC GCGGCGACGT CGAGGCGGCG CGGACCGCCG TCGCGGCCGA CCGGGCTGCG GCGGAGACGC GCTGGGAGGC CGAGAAGGCG CTGGTGGCCG AAATTCTCGA GTTGCGCGCC CGGCTGCGGG CAGAGGGCGA TGCGCTGGAC GGCACACCGC CGCAGGCCGC CGAGGAGGCC GAGCCGCCCA GGGACGACCG TGCGGCCCTC CTCGACCGCC TGCGGCGTTG CAGCCGGGAT CTCGCCGAGG CGCAGGGGGA GCGGCCGCTG ATCCTGCCGA CGGTCGACCG TCAGGCGGTC GCCTCGGTGG TGCAGGACTG GACCGGCATC CCGATGGGGC GGATGCTGGC CAGCCGCAAC GAACGCGCGC TCGGCCTTGC GGACCTGCTG GCCCGGCGTG TCGTGGGACA GGATCATGCG ATGGAGGCCA TCGCGAGCCG GATCCGGACC GCGCAGGCGG GGCTCGGGCC GCCGGAGAAG CCGCTCGGGG TCTTCCTGCT CTGCGGACCC TCGGGCGTCG GCAAGACCGA GACGGCGCTG GCCTTGGCCG AACAGCTGCA CGGTGGCGAG CAGGCTCTCA TCACGATCAA CATGAGCGAG TTTCAGGAGG CGCACACGGT CTCGACGCTG AAGGGCTCGC CCCCGGGCTA TGTGGGCTAT GGCAAGGGCG GCATCCTGAC GGAGGCGGTG CGGCGAAAAC CCTATTCGGT GATCCTGCTC GACGAGGTCG AGAAGGCGCA TCCCGACGTC CATGAAATAT TCTTTCAGGT GTTCGACAAG GGAAGGATGG ACGACAGCGA AGGGCGGCAG ATCGATTTCC GCAATACGGT GATCCTGCTG ACCTCGAACG TCGGCACCGA CGAGATCGTG GAGGCTGCGG GGCAGGATCT GGCAGAAGTG TCGGCCGCCC TCCGCGCGCC GCTTCTACAG GTCTTTCCGG CCGCGCTGCT GGGGCGGATG ATCGTGCTGC CGTTCCTGCC GCTCTCGGAC CGGATGATCG CGGCCATCGC GGGGCAGAAG CTCGAGGCCA TTGCCCGGCG GCTGAAGGCA GGGCACGGCG CCGAGTTGGT TCTGGGCGAG GGCGTGCTCG AGACGATCCG CGCCCGCTGC ACCGAGGTCG AGTCGGGCGG ACGGATGATC GATGCGATCC TGAGCGGCAC CCTGCTGCCG GAACTGAGCC GCAAGCTGCT CGAGCGCCAG CTCGCGGGGG CGGCCTTCAG CCGGGTGACC CTCACCGGCG GGCCCGCGGG CTTTTCCTAT GCGTTCGAGA CGGAGGCGGA TCATGCATGA
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Protein sequence | MPRGSQETVK RKELVAKLNP TCLAAFSAAA QAAKARGNPY VELVHLIEAL LAADRSDMAL LMRAAGCDAG RLSADVARAV DVLPRGASAV EEFSDHLFHA IREGWTFGSL RFGDDRVRSG YLLLGALRVP VLEALLMRIS GAFGQVDAES LSETFRDLTQ GSAEGDAAPP PARPGAADGS ALARYATDLT ARAREGRLDP VVGRDPEIRQ IIDILMRRRQ NNPILTGEAG VGKTAVVEGL ALRLARGDVP PPLRTVTLWM LDLGLMQAGA SMKGEFEKRL KSVIDEIQAS DAPVILFIDE AHTLIGAGGA AGTGDAANLL KPALARGELR TVAATTWAEY KQHIEPDPAL TRRFQVVRIE EPSEEAAIRM CRGVAAVLER HHRVEILDEA VGAAVRLSHR YLPARQLPDK AISLLDTACA RVAVSQHATP AEVEDIDRRA QALEIEAGIL EREEAVGMDV TARRGDVEAA RTAVAADRAA AETRWEAEKA LVAEILELRA RLRAEGDALD GTPPQAAEEA EPPRDDRAAL LDRLRRCSRD LAEAQGERPL ILPTVDRQAV ASVVQDWTGI PMGRMLASRN ERALGLADLL ARRVVGQDHA MEAIASRIRT AQAGLGPPEK PLGVFLLCGP SGVGKTETAL ALAEQLHGGE QALITINMSE FQEAHTVSTL KGSPPGYVGY GKGGILTEAV RRKPYSVILL DEVEKAHPDV HEIFFQVFDK GRMDDSEGRQ IDFRNTVILL TSNVGTDEIV EAAGQDLAEV SAALRAPLLQ VFPAALLGRM IVLPFLPLSD RMIAAIAGQK LEAIARRLKA GHGAELVLGE GVLETIRARC TEVESGGRMI DAILSGTLLP ELSRKLLERQ LAGAAFSRVT LTGGPAGFSY AFETEADHA
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