Gene Rsph17029_3103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3103 
Symbol 
ID4898196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp117923 
End bp118663 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content67% 
IMG OID640113705 
ProductABC transporter related 
Protein accessionYP_001044975 
Protein GI126463862 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.209111 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.482435 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGAC CCATGCTCGA AATCGTCGCG CTCGAGAAAA CCTTCGGAGA GCTCAAGGTC 
CTGCGCGACA TCAACCTGCG GGTCGCCACC GGCGAGATGG TCTTCGTCAT CGGCCCTTCG
GGATCGGGCA AGTCCACCAT GCTGCGCTGT TGCAACCGGC TGGAGGAGCC CACCTCGGGC
GCGATCCTGA TCGACGGCAA GGACATCGTC GGCTGCTCCT CCTCGGCGCT GAACCGGATG
CGGCTCGAGG TGGGCATGGT GTTTCAGGGC TTCCACCTCT ATCCGCACAT GACGGTGGTG
GCGAATGTGA TGCTCGCCCA GATCAAGGCG CTGAAACGGT CGAAGGACGA GGCGCGCGAG
CGCGCACTGG CCATGCTCGA CCGCGTGGGC CTGCGTCACC GGGCCGAGAC CATGCCCACC
CAGCTCTCGG GCGGCCAGCA GCAGCGCGTG GCCATCGCCC GTGCCCTCGC GCTCGATCCC
AAGGTCATGC TGTTCGACGA GCCCACCTCG GCGCTCGACC CCGAGCTCGT GGGCTCGGTG
CTTGCCGTGA TGAAGGATCT CAAGGACAGC GGCATGACCA TGCTGGTCGT GAGCCACGAG
ATGGGCTTCG CCCGCGAGGC GGCCGACCGG GTCGTGTTCA TGGACGGCGG CCTCGTGGTC
GAGGAAGGCC CGCCCGAAGA GATCTTCGCC AATCCGAAGG CCGAGCGGAC GCAGGCCTTC
CTCTCGCGCG TGCGGGCCTG A
 
Protein sequence
MSRPMLEIVA LEKTFGELKV LRDINLRVAT GEMVFVIGPS GSGKSTMLRC CNRLEEPTSG 
AILIDGKDIV GCSSSALNRM RLEVGMVFQG FHLYPHMTVV ANVMLAQIKA LKRSKDEARE
RALAMLDRVG LRHRAETMPT QLSGGQQQRV AIARALALDP KVMLFDEPTS ALDPELVGSV
LAVMKDLKDS GMTMLVVSHE MGFAREAADR VVFMDGGLVV EEGPPEEIFA NPKAERTQAF
LSRVRA