| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3039 |
|---|
| Symbol | |
|---|
| ID | 4899137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009050 |
|---|
| Strand | - |
|---|
| Start bp | 48221 |
|---|
| End bp | 49015 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640113641 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001044911 |
|---|
| Protein GI | 126463798 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.645477 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATCC ACAAGACCTC GAAGCCGATG GGGATCCTCG TCGCAGTGCT CTTCCTCTAT
CTGCTCGCGC CGGTGATCCT CGTCTTTCCG ATCTCGCTCT CGGGCGACAG CGTGCTGCGC
TTTCCGCCGA CCTCCTGGTC CCTCCGCTGG TACGAGGCCC TGTTCGAGAA CCGCGCCATG
CTCGGCGCCT TCTGGACGAG CCTGTCGCTT GCGGCCATCG TCACCGTGCT CTCGCTGGTG
ATCGCGGTGC CGGCGGCCTG GGTGATGGTG CGGATGGAGT TCCGCGGGCG GGATCTCCTG
TTCAACCTCT TCACCGCGCC GCTCCTGCTG CCCACCATCG TGCTGGGGCT CGCGATCCTC
ATCGTCTTCG CCTCCTTCGG GCTTCTGGCG ACGATGCAGG GCCTGATCCT CGCCCACCTC
GTCATCACGC TGCCCTATGC GCTGCGCATC CTGGCCGTTT CGCTCGCCAC GCAGAACATG
GCCTGCGAGG AGGCCGCGAA GACCCTCGGC GCCAAGCCCC TCACCGTCTT CTTCCGGGTG
ACGCTGCCGA TGCTCACCCC GGGGATTGTG GCGGCGGCGG CGCTCTGCTT CCTCGTCTCC
TTCGACGAGG TGGTGATCAC GCTGTTTCTC ACCGGGCCGC GCATCAGCAC GCTGCCGGTC
GAGCTCTACA ACTACGTCTA CAACACCGCC GATCCGCTGG TGGCCGCGGC CTCGGTGCTG
CTGATCCTGC TGACGCTGGG CGTGATCCTC GTGGTCGAGC GCGCGATGGG CCTCGGGCGG
GCCTTCGTGA AGTAA
|
|---|
| Protein sequence | MQIHKTSKPM GILVAVLFLY LLAPVILVFP ISLSGDSVLR FPPTSWSLRW YEALFENRAM
LGAFWTSLSL AAIVTVLSLV IAVPAAWVMV RMEFRGRDLL FNLFTAPLLL PTIVLGLAIL
IVFASFGLLA TMQGLILAHL VITLPYALRI LAVSLATQNM ACEEAAKTLG AKPLTVFFRV
TLPMLTPGIV AAAALCFLVS FDEVVITLFL TGPRISTLPV ELYNYVYNTA DPLVAAASVL
LILLTLGVIL VVERAMGLGR AFVK
|
|---|
| |