Gene Rsph17029_2892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_2892 
Symbolrho 
ID4897792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp3050118 
End bp3051386 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content62% 
IMG OID640113495 
Producttranscription termination factor Rho 
Protein accessionYP_001044766 
Protein GI126463652 
COG category[K] Transcription 
COG ID[COG1158] Transcription termination factor 
TIGRFAM ID[TIGR00767] transcription termination factor Rho 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAAC GTCTCAACCT CGCTGACCTG AAGGCCAAGA CTCCGGCCGA TCTCCTGGCC 
ATGGCCGAGG AGTGGGAGAT CGAGAACGCG CCTTCCATGC GGAAGGGCGA GATGATGTTC
TCGATCCTCA AGGAACATGC GGAGGAAGGC TACGAAGTCG GCGGAGACGG CGTGCTCGAG
GTGCTGCAAG ACGGTTTCGG CTTCCTGCGC TCGCCCGAGG CCAACTATCT GCCGGGCCCG
GACGACATCT ACGTCTCGCC CGAGATCCTG CGTCAGTTCT CGTTGCGCAC TGGTGACACG
ATCGAGGGCG TGATCGTCGC GCCCCGCGAG AACGAACGCT ATTTCAGCCT GACGCGGGTG
ACGAAGATCA ACTTCGACGA TCCCGAACGG GCGCGCCACA AGGTGCACTT CGACAACCTC
ACGCCGCTCT ATCCCGATGA ACGGCTGAAG ATGGAAGTCG ACGATCCCAC GATGAAGGAC
CGTTCCGCGC GCATCATCGA CCTGGTGGCG CCGATCGGGA AGGGGCAGCG CGGGCTGATC
GTAGCGCCGC CGCGGACCGG CAAGACGGTG CTCCTGCAGA ACATCGCCCA TTCCATCGCG
ACCAATCACC CCGAGTGCTA CCTGATCGTG CTGCTCATCG ACGAGCGGCC CGAGGAGGTC
ACGGACATGC AGCGGTCGGT GAAGGGGGAG GTTGTCTCCT CGACCTTCGA CGAGCCCGCC
ACGCGGCACG TCGCCGTGGC CGAGATGGTC ATCGAGAAGG CCAAGCGCCT CGTCGAGCAC
AAGCGCGACG TGGTGATCCT GCTCGATTCG ATCACCCGCC TCGGGCGCGC CTTTAACACC
GTGGTGCCCT CGTCCGGCAA GGTGCTGACC GGCGGCGTCG ATGCCAACGC GCTTCAGCGT
CCGAAAAGGT TTTTCGGCGC AGCGCGGAAC ATCGAGGAAG GCGGGTCGCT GACGATCATC
GCGACAGCCC TGATCGATAC CGGCAGCCGG ATGGACGAAG TGATCTTCGA AGAATTCAAG
GGTACCGGCA ACTCCGAGAT CGTCCTTGAC CGGAAGGTCG CCGACAAGCG CGTGTTCCCC
GCCATGGACA TCCTCAAATC CGGCACCCGG AAAGAGGATC TGCTGGTCGA CAAGTCCGAT
CTGCAGAAGA CCTACGTCCT GCGCCGCATC CTGAACCCGA TGGGCACCAC CGATGCGATC
GAGTTCCTGA TCTCCAAGCT GCGGCAGACC AAGAGCAACG CGGAATTCTT CGATTCCATG
AACACCTGA
 
Protein sequence
MNERLNLADL KAKTPADLLA MAEEWEIENA PSMRKGEMMF SILKEHAEEG YEVGGDGVLE 
VLQDGFGFLR SPEANYLPGP DDIYVSPEIL RQFSLRTGDT IEGVIVAPRE NERYFSLTRV
TKINFDDPER ARHKVHFDNL TPLYPDERLK MEVDDPTMKD RSARIIDLVA PIGKGQRGLI
VAPPRTGKTV LLQNIAHSIA TNHPECYLIV LLIDERPEEV TDMQRSVKGE VVSSTFDEPA
TRHVAVAEMV IEKAKRLVEH KRDVVILLDS ITRLGRAFNT VVPSSGKVLT GGVDANALQR
PKRFFGAARN IEEGGSLTII ATALIDTGSR MDEVIFEEFK GTGNSEIVLD RKVADKRVFP
AMDILKSGTR KEDLLVDKSD LQKTYVLRRI LNPMGTTDAI EFLISKLRQT KSNAEFFDSM
NT