Gene Rsph17029_2891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_2891 
SymboltrmE 
ID4897768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp3048806 
End bp3050092 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content67% 
IMG OID640113494 
ProducttRNA modification GTPase TrmE 
Protein accessionYP_001044765 
Protein GI126463651 
COG category[R] General function prediction only 
COG ID[COG0486] Predicted GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACGA TCTACGCCTT GGCCAGCGCA CGCGGCAAGG CCGGAGTGGC GGTTTTGCGC 
CTTTCCGGAC CGCGGTCGCA TGAGGCGGTG CAGGCGTTCG GCGTTCTTTT GCCCCCCCTC
CGGCACGCGG CCCTGCGGCG TCTGACGTGG AACGATGAAG TTCTCGACGA AGCGCTGGTG
CTGCTCTTCG GCGCTGGCGC CAGTTTCACT GGTGAAACCT CGGCCGAACT GCATCTCCAT
GGTAGTCCTG CTGCCGTCTC TTCGGTGCTC CGGGTCCTGT CCGGCCTGCC CGGTCTGAGG
GCGGCCGAAG CCGGGGAGTT CACCCGCCGG GCCCTGGAGA ACGGTCGGCT CGACCTCGCG
CAGGTCGAGG GGCTGGCTGA CCTGATCGAT GCCGAGACGG AAGCTCAGCG CCGTCAGGCG
ATGCGGGTCT TTTCCGGCGC CATCGGTGAG CGGGCAGAGC GGTGGCGGGC GGACCTCATT
CGGGCAGCGG CGCTGCTTGA GGCGACCATC GATTTCGCCG ATGAGGATGT GCCGGTCGAT
GTCACGCCCG AGGTGCTGAC CCTGATCGAC GGCCTGTTGG CGGATCTTCG GCGGGAGGTC
GACGGATCGC GGATTGCGGA ACGGATCCGC GACGGATTCG AGGTCGCCAT CGTTGGCGCG
CCCAATGCCG GGAAATCCAC GCTCCTCAAC GCTCTGGCGC GAAGAGAGGC GGCGATCACC
TCTGAGATCG CCGGCACGAC GCGCGATGTG ATCGAGGTGC GGATGGATCT CGACGGGCTT
CCTGTGACCT TCCTGGACAC GGCGGGACTG CGGGACACGT CGGACCTTGT CGAGAGCCTT
GGCATCGAAC GCGCCGTGAC CCGGGCCAAG GCCGCGGACC TGCGTGTTTT CCTTTTGGAC
GACAGCGGAC CATTGCCCGG CATCACCGTT CAGGCTGATG ATCTGGTTGT GCAGGGGAAG
GCGGACCTTC GCCCGGGCCA CGGGCTGCGC CTCTCGGGAC GGACGGGCGA GGGCGTGCCG
GAACTCGTGG CCGCCATCGG CGAGAGGCTG CTGGGACGCA CTGCAGGTGC CGGAAGTTTG
ACCCGCGAGC GGCACCGTCT CGCCATCGAA CGCGCAATCG GGGCTATGGA ATCGGTGCGG
GCTGAGCTAT TGAGGGGCCA ACAGCACACG GAACTGGCGG CAGATGACCT GCGGCGCGCG
ATCCGCTCCC TCGACTCTCT CGTGGGGAGG GTGGATGTGG AGTCGCTTCT GGGCGAGATC
TTTGCCAGCT TCTGCATCGG GAAGTGA
 
Protein sequence
MDTIYALASA RGKAGVAVLR LSGPRSHEAV QAFGVLLPPL RHAALRRLTW NDEVLDEALV 
LLFGAGASFT GETSAELHLH GSPAAVSSVL RVLSGLPGLR AAEAGEFTRR ALENGRLDLA
QVEGLADLID AETEAQRRQA MRVFSGAIGE RAERWRADLI RAAALLEATI DFADEDVPVD
VTPEVLTLID GLLADLRREV DGSRIAERIR DGFEVAIVGA PNAGKSTLLN ALARREAAIT
SEIAGTTRDV IEVRMDLDGL PVTFLDTAGL RDTSDLVESL GIERAVTRAK AADLRVFLLD
DSGPLPGITV QADDLVVQGK ADLRPGHGLR LSGRTGEGVP ELVAAIGERL LGRTAGAGSL
TRERHRLAIE RAIGAMESVR AELLRGQQHT ELAADDLRRA IRSLDSLVGR VDVESLLGEI
FASFCIGK