Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_2891 |
Symbol | trmE |
ID | 4897768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 3048806 |
End bp | 3050092 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640113494 |
Product | tRNA modification GTPase TrmE |
Protein accession | YP_001044765 |
Protein GI | 126463651 |
COG category | [R] General function prediction only |
COG ID | [COG0486] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACGA TCTACGCCTT GGCCAGCGCA CGCGGCAAGG CCGGAGTGGC GGTTTTGCGC CTTTCCGGAC CGCGGTCGCA TGAGGCGGTG CAGGCGTTCG GCGTTCTTTT GCCCCCCCTC CGGCACGCGG CCCTGCGGCG TCTGACGTGG AACGATGAAG TTCTCGACGA AGCGCTGGTG CTGCTCTTCG GCGCTGGCGC CAGTTTCACT GGTGAAACCT CGGCCGAACT GCATCTCCAT GGTAGTCCTG CTGCCGTCTC TTCGGTGCTC CGGGTCCTGT CCGGCCTGCC CGGTCTGAGG GCGGCCGAAG CCGGGGAGTT CACCCGCCGG GCCCTGGAGA ACGGTCGGCT CGACCTCGCG CAGGTCGAGG GGCTGGCTGA CCTGATCGAT GCCGAGACGG AAGCTCAGCG CCGTCAGGCG ATGCGGGTCT TTTCCGGCGC CATCGGTGAG CGGGCAGAGC GGTGGCGGGC GGACCTCATT CGGGCAGCGG CGCTGCTTGA GGCGACCATC GATTTCGCCG ATGAGGATGT GCCGGTCGAT GTCACGCCCG AGGTGCTGAC CCTGATCGAC GGCCTGTTGG CGGATCTTCG GCGGGAGGTC GACGGATCGC GGATTGCGGA ACGGATCCGC GACGGATTCG AGGTCGCCAT CGTTGGCGCG CCCAATGCCG GGAAATCCAC GCTCCTCAAC GCTCTGGCGC GAAGAGAGGC GGCGATCACC TCTGAGATCG CCGGCACGAC GCGCGATGTG ATCGAGGTGC GGATGGATCT CGACGGGCTT CCTGTGACCT TCCTGGACAC GGCGGGACTG CGGGACACGT CGGACCTTGT CGAGAGCCTT GGCATCGAAC GCGCCGTGAC CCGGGCCAAG GCCGCGGACC TGCGTGTTTT CCTTTTGGAC GACAGCGGAC CATTGCCCGG CATCACCGTT CAGGCTGATG ATCTGGTTGT GCAGGGGAAG GCGGACCTTC GCCCGGGCCA CGGGCTGCGC CTCTCGGGAC GGACGGGCGA GGGCGTGCCG GAACTCGTGG CCGCCATCGG CGAGAGGCTG CTGGGACGCA CTGCAGGTGC CGGAAGTTTG ACCCGCGAGC GGCACCGTCT CGCCATCGAA CGCGCAATCG GGGCTATGGA ATCGGTGCGG GCTGAGCTAT TGAGGGGCCA ACAGCACACG GAACTGGCGG CAGATGACCT GCGGCGCGCG ATCCGCTCCC TCGACTCTCT CGTGGGGAGG GTGGATGTGG AGTCGCTTCT GGGCGAGATC TTTGCCAGCT TCTGCATCGG GAAGTGA
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Protein sequence | MDTIYALASA RGKAGVAVLR LSGPRSHEAV QAFGVLLPPL RHAALRRLTW NDEVLDEALV LLFGAGASFT GETSAELHLH GSPAAVSSVL RVLSGLPGLR AAEAGEFTRR ALENGRLDLA QVEGLADLID AETEAQRRQA MRVFSGAIGE RAERWRADLI RAAALLEATI DFADEDVPVD VTPEVLTLID GLLADLRREV DGSRIAERIR DGFEVAIVGA PNAGKSTLLN ALARREAAIT SEIAGTTRDV IEVRMDLDGL PVTFLDTAGL RDTSDLVESL GIERAVTRAK AADLRVFLLD DSGPLPGITV QADDLVVQGK ADLRPGHGLR LSGRTGEGVP ELVAAIGERL LGRTAGAGSL TRERHRLAIE RAIGAMESVR AELLRGQQHT ELAADDLRRA IRSLDSLVGR VDVESLLGEI FASFCIGK
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