Gene Rsph17029_2856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_2856 
Symbol 
ID4897533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp3013481 
End bp3014203 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content72% 
IMG OID640113459 
Productcompetence protein F 
Protein accessionYP_001044730 
Protein GI126463616 
COG category[R] General function prediction only 
COG ID[COG1040] Predicted amidophosphoribosyltransferases 
TIGRFAM ID[TIGR00201] comF family protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATTGC AAGCGGCGCT GCGCCTCCTG TTTCCGCCGC AATGCCTGCT CTGCGAGACG 
CAGGTGACCA CGGAGTTCGG CCTCTGCGGT GCCTGCTGGC GCGACACGCC CTTCATCGCG
GGTCTGGTCT GCGATCGCTG CGGCGCGCCG TTGCCGGGCG AGGATCCGGG GCATCCGGTC
CGGTGCGACG ACTGCCTGTC CTCGGCGCGT CCCTGGGATC ACGGTCGGGC GGCGCTCCTT
TACCGCGACA ACGGCCGCAA GCTTGCGCTG GCGCTGAAGC ACGGGGACCG GCTCGATCTG
GCGCGCCCGC TCGCCGGCTG GATCCTCAGG GCCGCGCGTC CGATCCTGCG GCCGGGGACA
TTGGTCGTGC CGGTGCCGCT CCACTGGACG CGGCTTCTGA CGCGGCGCTA CAACCAGTCC
GCGCTTCTGT CGGCCGAGCT TGCGCGGCAG GCGGGGCTCG ACCATTGCCC CGATGCGCTG
GTTCGCGGGC GCAACACCCG CAGTCAGGAG GGGCGCAGCC GCGAGGGCCG GTTCGAGAAC
ATGACCGGCG CGATCCTGCC CCATCCGCGG CGCGGACGGC TGCTGAAGGG AAGGCCGGTC
CTGATCCTCG ACGACGTGAT GACCTCGGGC GCCACGCTCG CCGCCGCAAC CGAAGCCTGT
CAGGCGGCAG GCGCCACCTC CGTCTCGGTC GCGGTGCTGG CGCGCGTTGC GAAGGACACC
TAA
 
Protein sequence
MGLQAALRLL FPPQCLLCET QVTTEFGLCG ACWRDTPFIA GLVCDRCGAP LPGEDPGHPV 
RCDDCLSSAR PWDHGRAALL YRDNGRKLAL ALKHGDRLDL ARPLAGWILR AARPILRPGT
LVVPVPLHWT RLLTRRYNQS ALLSAELARQ AGLDHCPDAL VRGRNTRSQE GRSREGRFEN
MTGAILPHPR RGRLLKGRPV LILDDVMTSG ATLAAATEAC QAAGATSVSV AVLARVAKDT