Gene Rsph17029_2838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_2838 
Symbol 
ID4897392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp2990864 
End bp2992165 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content66% 
IMG OID640113441 
Productxylose isomerase 
Protein accessionYP_001044712 
Protein GI126463598 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2115] Xylose isomerase 
TIGRFAM ID[TIGR02630] xylose isomerase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0695629 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACT TCTTCGCGGG TATCCCGCAG ATCCGCTACG AGGGCGAAGG CTCCTCCAAC 
GAATTCGCCT TCCGCCACTA CAATCCCGAC GAGGTGATCC TCGGCAAGCG GATGGAAGAG
CATCTGCGAT TCGCGGTCGC CTGGTGGCAC AGCTTCGCCT GGCCGGGCGG CGATCCGTTC
GGCGGCCAGA CCTTCAACCG GCCGTGGTTC GGCGATACGC TGGACCTCGC GAAGCTCAAG
GCCGACGTGG CCTTCGAGAT GTTCGACATC CTCGGCGCGC CCTTCTTCTG CTTCCACGAT
GCCGACATCC GCCCCGAAGG CGCGACCTTC GCCGAAAGCA AGCGCAACCT CGAGGAGATC
GTCGACCACA TCGGCACCAG GATGGAAGGG TCGAAGACGA AGCTCCTCTG GGGCACGGCG
AACCTCTTCT CGCACCGCCG CTTCATGTCG GGCGCGGCCA CCAACCCCGA TCCCGACGTC
TTCGCCTGGT CGGCGGCCAC GGTGAAGGGC TGCATGGACG CCACCATGAA GCTCGGCGGC
GCGAACTATG TGCTCTGGGG CGGGCGCGAG GGCTATGAGA CGCTGCTCAA CACCGACCTC
ACCCGCGAGG CCGAGAATGC GGGCCGCTTC CTGCAGATGG TGGTGGACTA CAAGCACAAG
ATCGGTTTCC AGGGCACGAT CCTGATCGAG CCGAAGCCGC AGGAGCCCTC GAAGCACCAG
TACGACTATG ACGTGGCGAC GGTCTACGGC TTCCTCAAGC GCTTCGGCCT TGAGAAGGAG
GTGAAGCTCA ACATCGAGCA GGGCCATGCG ATCCTCGCCG GCCACAGTTT CGAGCACGAG
CTGGCGTTGG CGGCGAGCCT CGGCATCCTC GGCTCGATCG ACATGAACCG GAACGACTAT
CAGTCGGGCT GGGACACCGA TCAGTTCCCG CACAACCACC CCGAGATGGC CTTGGCCTAT
TACGAGATCC TGCGGGCGGG CGGCTTCACC ACGGGCGGCA CGAACTTCGA CGCGAAGATC
CGCCGCCAGA GCCTCGATCC CGAGGATCTC GTGCTGGCCC ATGTGGGTGG CATGGACACC
TGCGCCCGTG CGCTGAAGGC CGCGGCGCGG CTCTATGAGG ACGGAAGCCT CGAGGCGGCC
CGCGCCGCGC GCTATGCGGG CTGGGAAACG CCCGAGGCGC AGGCGATGCT CGCCTCGTCG
CTGGAGGAGA TCGAGGCCCG CGTGCTGGCC GAGGGGATCA ACCCCGAGCC GCGCTCGGGC
CGGCAGGAGC GGCTGGAAAA CCTCTGGAAC CGCTTCGTCT GA
 
Protein sequence
MTDFFAGIPQ IRYEGEGSSN EFAFRHYNPD EVILGKRMEE HLRFAVAWWH SFAWPGGDPF 
GGQTFNRPWF GDTLDLAKLK ADVAFEMFDI LGAPFFCFHD ADIRPEGATF AESKRNLEEI
VDHIGTRMEG SKTKLLWGTA NLFSHRRFMS GAATNPDPDV FAWSAATVKG CMDATMKLGG
ANYVLWGGRE GYETLLNTDL TREAENAGRF LQMVVDYKHK IGFQGTILIE PKPQEPSKHQ
YDYDVATVYG FLKRFGLEKE VKLNIEQGHA ILAGHSFEHE LALAASLGIL GSIDMNRNDY
QSGWDTDQFP HNHPEMALAY YEILRAGGFT TGGTNFDAKI RRQSLDPEDL VLAHVGGMDT
CARALKAAAR LYEDGSLEAA RAARYAGWET PEAQAMLASS LEEIEARVLA EGINPEPRSG
RQERLENLWN RFV